DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tspan10

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_663338.2 Gene:Tspan10 / 208634 MGIID:2384781 Length:332 Species:Mus musculus


Alignment Length:255 Identity:67/255 - (26%)
Similarity:109/255 - (42%) Gaps:19/255 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SCGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPP-IVLIVTGLIIFLI 66
            |.|.:.:||::|..|.||::..|..|.||...|...........|.|...| ::|::.||::.::
Mouse    69 STGSNCVKYLIFLSNFLFSLPSLLALAAGLWGLTVKRSQGIGWGGPVPTDPMLMLVLGGLVVSVV 133

  Fly    67 ASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSEDTM 131
            :..||.||..|:..||..:...:.....:|...|:......|.|:..:|.:|..:|.....:..:
Mouse   134 SLSGCLGAFCENSCLLHWYCGAVLFCLALEALAGVLMVTLWKPLQDSLKYTLHAAIIHYWDDPDL 198

  Fly   132 AW--DNIQQKLMCCGVDSPADW-RTLSAN--------KTLPGSCC-QPQYIDSTVGHCLESPALG 184
            .:  |.:|..|.|||..|..|| :.|..|        .:||.||| .||...:.|.......|||
Mouse   199 HFLLDQVQLGLQCCGAVSYQDWQQNLYFNCSSPGVQACSLPASCCINPQEDGAVVNTQCGFGALG 263

  Fly   185 KDK------YFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQERA 238
            .|:      .|..||...|::.:..|...:....:.:..||...::||..|..::....|
Mouse   264 LDQNVAGQVVFLQGCWPALQEWLRGNTGAIGDCAVAVVMIQGTELLLAACLLRALAVHEA 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 64/240 (27%)
tetraspanin_LEL <134..205 CDD:351888 27/86 (31%)
Tspan10NP_663338.2 Tetraspanin 75..225 CDD:459767 40/149 (27%)
oculospanin_like_LEL 171..290 CDD:239420 32/118 (27%)

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