DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tsp-11

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_509546.4 Gene:tsp-11 / 192064 WormBaseID:WBGene00006637 Length:287 Species:Caenorhabditis elegans


Alignment Length:286 Identity:79/286 - (27%)
Similarity:121/286 - (42%) Gaps:65/286 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SCGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHF------VEG-------RVLA--P 52
            ||....:|:.||.||::|.:.||..|..|..::.|....::.      |:|       |.||  |
 Worm    12 SCTARALKFSLFIFNLVFLLCGLICLGIGLWLVLDKYAIDNLAFATAKVQGYDQDAGLRDLATKP 76

  Fly    53 PIV------LIVTGLIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLE 111
            ..|      |.|.|.|:.::|.|||.||.||...||..::..|.:|..:::|..|.|.:.....|
 Worm    77 TAVRQFGYLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYSSCLMLILAIQIAATIYAFLHSHMFE 141

  Fly   112 GMVKNSLQESIKRSNSEDTM--------------AWDNIQQKLMCCGVDSP------ADWRTLSA 156
            ...::.|..|:|..|..|.|              |||.|..:..||||||.      :.|..|:.
 Worm   142 NDFRDILHSSLKMYNGTDNMKVSNNPQDGLLVKTAWDKIMIEKSCCGVDSKIGEFNNSGWYQLNH 206

  Fly   157 NK-TLPGSCCQPQ-------YIDSTVGHCLESPALGKDKYFQVGCVGKLKDRIEK---NAIILIG 210
            .: ..|.:||.|.       |.::.:.|             ..||..|:.:..|:   :..|:..
 Worm   207 GRYQFPPACCPPDEHGRLRPYCNTIMRH-------------SHGCYAKIAESFEEVTSHFKIVSW 258

  Fly   211 VGIGIAFIQILGIVLACYLANSIRQE 236
            ..:..|.||::|||:..:|.:||..|
 Worm   259 TVVLFALIQVVGIVVGFWLCDSITSE 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 74/273 (27%)
tetraspanin_LEL <134..205 CDD:351888 20/87 (23%)
tsp-11NP_509546.4 Tetraspanin 18..278 CDD:459767 73/272 (27%)

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