DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tsp-7

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_492636.1 Gene:tsp-7 / 192062 WormBaseID:WBGene00006633 Length:232 Species:Caenorhabditis elegans


Alignment Length:234 Identity:74/234 - (31%)
Similarity:124/234 - (52%) Gaps:14/234 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIASL 69
            |.:::||:||..|::..:.||.::|.|:::....:.....:....||.||:|:|.|.:..|:..|
 Worm     5 GVTIVKYLLFLANLVLWVGGLSLIIVGSILQLKFDNVLDILGDERLATPILLLVIGSLCTLLGFL 69

  Fly    70 GCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSEDTM--A 132
            ||.|||:|:..|.::||||||::...|:|..|............:.|.||..:.|.:....:  |
 Worm    70 GCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRGVESA 134

  Fly   133 WDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKL 197
            ||...|...||||.:.:||.|.:   |:|.|||    |:...|...|:..|     |:.||:..:
 Worm   135 WDKTHQLFECCGVTNSSDWLTFT---TIPDSCC----IEEIEGCARENAPL-----FEPGCIHSV 187

  Fly   198 KDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQE 236
            :..:.||..::.|:...:|.||::|:..||.|:.||.::
 Worm   188 EQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSILKD 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 71/223 (32%)
tetraspanin_LEL <134..205 CDD:351888 22/70 (31%)
tsp-7NP_492636.1 Tetraspanin 9..221 CDD:459767 71/223 (32%)
NET-5_like_LEL 104..195 CDD:239418 28/102 (27%)

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