DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tsp-5

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_502621.3 Gene:tsp-5 / 192061 WormBaseID:WBGene00006631 Length:241 Species:Caenorhabditis elegans


Alignment Length:255 Identity:56/255 - (21%)
Similarity:106/255 - (41%) Gaps:67/255 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NVLFAISGLGILIAGAVV-----------------------LADVNEFNHFVEGRVLAPPIVLIV 58
            |.||.|..||:::.|.::                       |..|:....|...|.::     |:
 Worm    11 NFLFFILNLGLIVVGVIITWYSIWMVLHQFEVTVARTSLVNLLSVDNIECFYVYRTIS-----IM 70

  Fly    59 TGLIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVF-------KKDLEGMVKN 116
            .|..:.::...|||.....|.|.|....||:.::|:|::   :|..:|       :::..|:.::
 Worm    71 IGGCMVVLGFCGCFAVGFGSKTALSVHLVLVFIVFVVKI---VAIVMFLANNDHLRREFVGVYRD 132

  Fly   117 SLQESI-KRSNSEDTMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSC-CQPQYIDSTV---GH 176
            .|..:. ..|.:::|:.|  :...|.|||.:...|:  |.|. ..|.|| |..:  ::.|   |.
 Worm   133 ELVANYHNNSRTKNTLDW--VHTSLKCCGANGCEDF--LPAG-NFPTSCECGTK--NAVVRMEGC 190

  Fly   177 CLESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQE 236
            .|.:.|:.:|...||..:|.:        .:||.:|:         ::.|..:.:.||:|
 Worm   191 ALITWAVFEDGTLQVAFLGLI--------CMLIELGL---------MIFAAIVIDRIRRE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 53/248 (21%)
tetraspanin_LEL <134..205 CDD:351888 19/74 (26%)
tsp-5NP_502621.3 Tetraspanin 11..167 CDD:459767 35/167 (21%)
tetraspanin_LEL 116..191 CDD:239401 18/81 (22%)

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