DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tsp-20

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_510014.1 Gene:tsp-20 / 181376 WormBaseID:WBGene00006646 Length:279 Species:Caenorhabditis elegans


Alignment Length:249 Identity:49/249 - (19%)
Similarity:91/249 - (36%) Gaps:56/249 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHF-VEGRVLAP--PIVLIVTGLIIFLIASLG 70
            |.|:|....:||....:.:.|....::..:.  :|| |:...||.  .:..::.|.::....|..
 Worm    31 ISYLLVIVGILFLALAIWLYIFRGDLIPLIQ--SHFYVKCIYLAVGCGVFNVIIGFLVHSAVSNR 93

  Fly    71 C----------FGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRS 125
            |          |..|.|...:..||:.               .:.::::|...:.|.:   :...
 Worm    94 CALVFYLLMLIFSMIMEGCLIYFTFSY---------------HATYEQELNASLPNDI---LNNY 140

  Fly   126 NSEDTM--AWDNIQQKLMCCGVDSPADW-------RTLSANKT-------LPGSCCQPQYIDSTV 174
            |.:..:  |.:.:|:...|||.::..||       ..|...||       :|.|||:..:  ...
 Worm   141 NLDPNIAKAVNYLQRDSKCCGSNAFNDWPKPEVEDHYLPYAKTVVQRVQYIPDSCCKSTH--QRK 203

  Fly   175 GHCL-ESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLAC 227
            |..| :||    :..|..||:..||:.:..|...|..|......:....::..|
 Worm   204 GCALSDSP----NNIFYRGCLPFLKEEVYNNLNFLFTVTAASLVLHFANLIFGC 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 49/249 (20%)
tetraspanin_LEL <134..205 CDD:351888 22/85 (26%)
tsp-20NP_510014.1 Tetraspanin 25..257 CDD:459767 49/249 (20%)
CD151_like_LEL 118..231 CDD:239408 27/136 (20%)

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