DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tsp-14

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001367834.1 Gene:tsp-14 / 180761 WormBaseID:WBGene00006640 Length:451 Species:Caenorhabditis elegans


Alignment Length:278 Identity:68/278 - (24%)
Similarity:119/278 - (42%) Gaps:62/278 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGA---------VVLADVNEFNHFVEGRVLAPPIVLIVTGLIIF 64
            :|:::|..|.:..:.|:|||..|.         |.|.|:          :|.|.|::.:.|..|.
 Worm    54 LKWLVFLLNSIVFLVGVGILALGVYLFIKDFREVKLVDI----------ILNPAILISIFGFSIC 108

  Fly    65 LIASLGCFGAIKESPTLLITFA--VLLAVIFIVELAVGIAASVFKKDLEGMVKN-SLQESIKRSN 126
            :::..|..||::::..||..||  |.|:.|.:|.:.:......:....||:..| .|..::|..:
 Worm   109 VVSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYH 173

  Fly   127 SEDTMA--WDNIQQKLMCCGVDSPA----DWR-TLSANKT----------LPGSCCQPQYIDSTV 174
            :...:|  .|.:|:.|.||||.|.|    ||. :...|.|          :|.|||:...|....
 Worm   174 TNRNLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRKSVISEAA 238

  Fly   175 G------------HCLESPALGK-------DKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQI 220
            |            .|.:: ||.|       |.|.: ||:..|:...|.:| :.:|..:.:..:.:
 Worm   239 GSSNPLLPAMRSLECWQN-ALTKRPGDLEHDIYTR-GCLQPLRTLFESHA-VHVGAFVALLIVPV 300

  Fly   221 -LGIVLACYLANSIRQER 237
             :.:.|...||..:..:|
 Worm   301 CISVCLTNILAKQVDHQR 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 66/270 (24%)
tetraspanin_LEL <134..205 CDD:351888 29/104 (28%)
tsp-14NP_001367834.1 Tetraspanin 54..>193 CDD:459767 37/148 (25%)
tetraspanin_LEL 145..286 CDD:351888 35/142 (25%)

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