DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and LOC1279854

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_319633.4 Gene:LOC1279854 / 1279854 VectorBaseID:AGAMI1_010575 Length:253 Species:Anopheles gambiae


Alignment Length:223 Identity:51/223 - (22%)
Similarity:106/223 - (47%) Gaps:18/223 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIASLGC 71
            ::|||::.....:..:..:..::.|||:......:..|::...:.....||..|:::..::..|.
Mosquito     9 NMIKYLILMLTFMCVVIEIIQIVVGAVLHRLFATYTVFIDNDFVRATHFLIAVGIVLVFLSIFGF 73

  Fly    72 FGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSEDTM--AWD 134
            .|.|.|:..::..:|.:..::.|:|:.:..||......::.|:...:..:|::..|:..|  :::
Mosquito    74 AGIIFENVIMIFLYAGMFGLMVILEIILASAAFSMYNRVDSMLTRRMNIAIQKFFSDRFMRASFN 138

  Fly   135 NIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLKD 199
            ::|.::.|||:.|.|||......:.||.|||: :..|..:.|             :.||...:.|
Mosquito   139 HMQNEMNCCGIQSYADWANFHPERDLPNSCCR-RVDDGCMPH-------------ERGCHAPMSD 189

  Fly   200 RI-EKNAIILIGVGIGIAFIQILGIVLA 226
            .| .:..:|..|..|.|.| |::.||.|
Mosquito   190 FIGSRTHMIATGTVIIIVF-QVICIVTA 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 51/221 (23%)
tetraspanin_LEL <134..205 CDD:351888 19/71 (27%)
LOC1279854XP_319633.4 None

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