DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and LOC1279031

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_318688.3 Gene:LOC1279031 / 1279031 VectorBaseID:AGAMI1_000850 Length:247 Species:Anopheles gambiae


Alignment Length:244 Identity:95/244 - (38%)
Similarity:135/244 - (55%) Gaps:19/244 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SCGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIA 67
            |...:.|||:||.||..|||:|:.|:..|..|....:.|...::.:..:.|..|:|.|..||:||
Mosquito     4 STSANFIKYLLFLFNFFFAITGVIIMAVGLTVQGAYHNFRDILDAKFFSIPTFLVVIGSFIFVIA 68

  Fly    68 SLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSED--- 129
            ..||.||.||:..:.:||:|||.:|||:|||.||:..|.:.|...:|.|:|..|:|....|:   
Mosquito    69 FFGCCGAYKENYCMTLTFSVLLILIFILELAAGISGYVLRNDTRELVSNALNSSMKSYGGENAGD 133

  Fly   130 -TMAWDNIQQKLMCCGVDSPADWRTLSA---NKT-LPGSCCQPQYIDSTVGH--CLE--SPALGK 185
             |:.||.||....||||.:.:||...:|   |:| ||.:||:.|  ...||:  |.:  |..|.|
Mosquito   134 ITLVWDEIQVDFDCCGVYNSSDWGRANAAKFNETFLPMTCCRQQ--TGAVGYVACPDPTSATLRK 196

  Fly   186 DKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIR 234
                 .||:....|.|:.:|:.|...||.:|.||..||:.|||||..|:
Mosquito   197 -----TGCIDSFGDFIKAHAVSLGAAGIALAVIQFFGILFACYLAKQIK 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 92/233 (39%)
tetraspanin_LEL <134..205 CDD:351888 27/78 (35%)
LOC1279031XP_318688.3 None

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