DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and LOC1275496

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_061516540.1 Gene:LOC1275496 / 1275496 VectorBaseID:AGAMI1_000373 Length:285 Species:Anopheles gambiae


Alignment Length:238 Identity:72/238 - (30%)
Similarity:132/238 - (55%) Gaps:22/238 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADV-NEFNHFVEGRVLAPPIVLIVTGLIIFLIASLGCF 72
            :||::|..::.||:.. .:|::.||.:.:: ::|.:|::.....||.:||..|:|:.:||..||.
Mosquito    15 VKYMIFVISITFAVVA-AMLLSMAVAIGNLFDDFQNFIDSHFFVPPNLLIAIGIILLVIALFGCV 78

  Fly    73 GAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSED--TMAWDN 135
            ||:|||..::..:..||.::|:::||..|.|.|.:..:..||:..:.:|:.....:|  ....|.
Mosquito    79 GALKESTAMINIYGALLLIVFVLQLAAAITAFVLRGQVSMMVRQKIFDSMGDYKQQDGYRNPIDT 143

  Fly   136 IQQKLMCCGVDSPADW-RTLSANKTL---PGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGK 196
            :|..|.|||||..:|| :.|.::.|:   |.:||....::   |.|:..         :.||..:
Mosquito   144 LQNTLECCGVDGFSDWAQFLPSDGTVMEYPETCCAAPPVN---GECMPR---------EYGCYSR 196

  Fly   197 LKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQERAK 239
            |...|.:.::::....:.:||:|:||.|.|..||::||  |||
Mosquito   197 LSWLISQGSVLIATGTVAVAFVQVLGAVCAFMLASAIR--RAK 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 66/228 (29%)
tetraspanin_LEL <134..205 CDD:351888 21/74 (28%)
LOC1275496XP_061516540.1 None

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