DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Cd9

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_031683.1 Gene:Cd9 / 12527 MGIID:88348 Length:226 Species:Mus musculus


Alignment Length:250 Identity:73/250 - (29%)
Similarity:114/250 - (45%) Gaps:49/250 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GPSLIKYVLFAFNVLFAISGLGILIAGAVVLAD-------VNEFNH--FVEGRVLAPPIVLIVTG 60
            |...|||:||.||.:|.::|:.:|..|..:..|       ..|.||  |..|     ..:||..|
Mouse     6 GSKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQENNHSSFYTG-----VYILIGAG 65

  Fly    61 LIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFK----KDLEGMVKNSLQES 121
            .::.|:..|||.||::||..:|..|...|.|||.:|:|..:.....|    |:|:...|::.|: 
Mouse    66 ALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAVWGYTHKDEVIKELQEFYKDTYQK- 129

  Fly   122 IKRSNSE---DTMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPAL 183
             .||..|   :|:  ..|...|.|||:..|.:       :.:..:|.:.|.::|           
Mouse   130 -LRSKDEPQRETL--KAIHMALDCCGIAGPLE-------QFISDTCPKKQLLES----------- 173

  Fly   184 GKDKYFQVGCVGKLKDRIEKNAIILIG-VGIGIAFIQILGIVLACYLANSIRQER 237
                 |||....:....:..|...:|| ||||||.:.|.|::.:..|..:||:.|
Mouse   174 -----FQVKPCPEAISEVFNNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRSR 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 69/238 (29%)
tetraspanin_LEL <134..205 CDD:351888 12/70 (17%)
Cd9NP_031683.1 Tetraspanin 10..217 CDD:459767 69/238 (29%)
CD9_LEL 109..191 CDD:239405 22/108 (20%)

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