DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tspan2b

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_005161955.1 Gene:tspan2b / 101883842 ZFINID:ZDB-GENE-100922-60 Length:212 Species:Danio rerio


Alignment Length:239 Identity:62/239 - (25%)
Similarity:100/239 - (41%) Gaps:42/239 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPP------IVLIVTGLII 63
            |...:|::||.||.:|.:.|..:|..|..:..|.|..:...|.   .|.      .:||..|.::
Zfish     7 GMKCVKFLLFIFNFIFWLMGSLVLAVGLWLRLDPNTVSLLGED---GPDTFFIGVYILIAAGGLV 68

  Fly    64 FLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSE 128
            .|:...||.||::||..||..|...|.|||..|:|.|:...:.|..:...:::...||...:|:.
Zfish    69 MLVGFFGCCGAVRESQCLLGLFFACLLVIFGAEVAAGVFGFINKDKIIQEIRHFYDESAGNNNNN 133

  Fly   129 DTMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGC 193
            .|:  .:....|.|||           ::...|.||                    |:..|...|
Zfish   134 ATV--QSYHTVLSCCG-----------SSTVTPSSC--------------------KNMVFNQTC 165

  Fly   194 VGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQER 237
            ...:::.......|:..||||||.:.|:|::.:..|..:||..|
Zfish   166 DVAIEEFFNSKLFIVGYVGIGIAGVMIIGMIFSMVLCCAIRNSR 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 58/227 (26%)
tetraspanin_LEL <134..205 CDD:351888 10/70 (14%)
tspan2bXP_005161955.1 Tetraspanin 23..203 CDD:459767 52/215 (24%)

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