DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and LOC101730599

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_017947977.1 Gene:LOC101730599 / 101730599 XenbaseID:XB-GENE-29084703 Length:311 Species:Xenopus tropicalis


Alignment Length:232 Identity:66/232 - (28%)
Similarity:114/232 - (49%) Gaps:25/232 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KYVLFAFNVLFAISGLGILIAGAVVLADVNEFNH-FVEGRVLAPPIVLIVTGLIIFLIASLGCFG 73
            |:.|..::.||::.||.||..|  :.|:.....| .:||..|||.::|::.|:|:|.::.:|..|
 Frog    18 KFSLSFYSTLFSLIGLVILCIG--IYAESERQKHRTLEGIFLAPAVILLLLGIIMFAVSFIGMVG 80

  Fly    74 AIKESPTLLITFAVLLAVIFIVELAVGIAASVF----KKDLEGMVKNSLQESIKRSNSEDTMAWD 134
            :::::..|:..|..:|..||::||.:.|...||    ||.....:...:|:.....:.::.|  |
 Frog    81 SLRDNILLVKLFFWVLLAIFLIELLLIIIELVFENQMKKFAHANILVGMQQYYDDLDFKNIM--D 143

  Fly   135 NIQQKLMCCGVDSPADWRT---LSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGK 196
            .:|:|..|||.|...||:.   .|.|.|.|.:|..|...      |:.....|..|....|....
 Frog   144 FVQEKFSCCGGDDFKDWKVNQYHSCNSTGPLACGVPYTC------CITGKESGGVKNTLCGYQTL 202

  Fly   197 LKDRIEKNAII-------LIGVGIGIAFIQILGIVLA 226
            .|:|:|.::||       .:|:.:|..:...:|:|||
 Frog   203 DKERLEVHSIIHVRGCIHAVGLWLGDNYGVTIGLVLA 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 66/232 (28%)
tetraspanin_LEL <134..205 CDD:351888 22/73 (30%)
LOC101730599XP_017947977.1 Tetraspanin 17..>154 CDD:459767 41/139 (29%)
penumbra_like_LEL 112..230 CDD:239411 32/125 (26%)

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