DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and TSPAN3

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_005715.1 Gene:TSPAN3 / 10099 HGNCID:17752 Length:253 Species:Homo sapiens


Alignment Length:238 Identity:73/238 - (30%)
Similarity:125/238 - (52%) Gaps:18/238 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRSCGPSLIKYVLFAFNVLFAISGLGIL-IAGAVVLADVNEFNHFVEG-RVLAPPIVLIVTGLII 63
            |..||.:..|.||...|::| ....||| ..||.|....::::||.|. ..|.|.:|:|..|.::
Human     1 MGQCGITSSKTVLVFLNLIF-WGAAGILCYVGAYVFITYDDYDHFFEDVYTLIPAVVIIAVGALL 64

  Fly    64 FLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSE 128
            |:|..:||...|:||...|.||.::|.::|:.|:.|.:...|::..:|..|..|:|:..|..|..
Human    65 FIIGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGT 129

  Fly   129 D----TMAWDNIQQKLMCCGVDSPADWRTL-----SANKTLPGSCCQPQYIDSTVGHCLESPALG 184
            :    :.|.|.:|::|.|||:.:.:||...     :.|:::|.|||:     .|..:|..|.|..
Human   130 NPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCR-----ETASNCNGSLAHP 189

  Fly   185 KDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLAC 227
            .|.|.: ||...:..::::..:.:|...:..|.||:||::.||
Human   190 SDLYAE-GCEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCAC 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 70/230 (30%)
tetraspanin_LEL <134..205 CDD:351888 21/75 (28%)
TSPAN3NP_005715.1 Tetraspanin 9..235 CDD:459767 70/230 (30%)
TM4SF8_like_LEL 104..210 CDD:239416 29/111 (26%)

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