DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and cd53

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_002942834.1 Gene:cd53 / 100496085 XenbaseID:XB-GENE-868554 Length:228 Species:Xenopus tropicalis


Alignment Length:239 Identity:79/239 - (33%)
Similarity:131/239 - (54%) Gaps:40/239 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLA--PPI----VLIVTGLIIFLIA 67
            :||::||||.||.::|..|:..|...:  ||.    :.|.:|.  |.:    .||..|:||.:..
 Frog     9 LKYLMFAFNFLFWVTGCSIIAIGIYFV--VNN----IYGDLLTNNPSLTVGNALIAIGIIIMVFG 67

  Fly    68 SLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVK----NSLQESIKRSNSE 128
            .|||.|||||:..||:||.:||.:|.:.|:.:.|...|::|.|:..|:    :|.::::|:::||
 Frog    68 FLGCMGAIKENKCLLLTFFILLLLILLAEVIMAILLFVYEKQLDNYVRDRLTSSFEQNLKQNSSE 132

  Fly   129 DTMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGC 193
               .|:.||:.|.|||::...||:     ..:|.|||    ..:....|.::      ..|::||
 Frog   133 ---TWNIIQRNLQCCGINGTKDWK-----DNIPNSCC----ASNANSKCSQA------DLFKMGC 179

  Fly   194 VGKLKDRIEKNAIILIGVG-IGIAFIQILG----IVLACYLANS 232
            ...||:..||| .:.:||| |.|:.|::||    :.|.|:::.|
 Frog   180 SEALKNWFEKN-FLYVGVGTICISVIEVLGMSFALTLYCHISRS 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 78/236 (33%)
tetraspanin_LEL <134..205 CDD:351888 20/70 (29%)
cd53XP_002942834.1 Tetraspanin 9..217 CDD:459767 77/232 (33%)
tetraspanin_LEL 104..195 CDD:351888 30/109 (28%)

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