DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tspan15

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001017773.1 Gene:tspan15 / 100000710 ZFINID:ZDB-GENE-050417-295 Length:296 Species:Danio rerio


Alignment Length:244 Identity:62/244 - (25%)
Similarity:116/244 - (47%) Gaps:31/244 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNH-FVEGRVLAPPIVLIVTGLIIFLIA 67
            |....:|:.|..:..:|.:.|..||..|  :.|:|....: .:||..|||.|:|||.|:|:|:::
Zfish    11 CSYFFLKFSLIGYATIFWLIGGFILAIG--IYAEVERQRYKTLEGVFLAPAIILIVLGIIMFIVS 73

  Fly    68 SLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSEDTMA 132
            .:|...:::::..||..|..:||:..::||..||.|.:||.....::..::::.:  .|..|.:.
Zfish    74 FIGVLASLRDNLCLLKVFLYMLALCLVLELVGGIVALIFKNQTVDILNKNIRKGM--VNYYDDLD 136

  Fly   133 WDNI----QQKLMCCGVDSPADWR-TLSANKTLPG--------SCC---QPQYIDSTVGHCLESP 181
            :.||    |:...|||.....||. .:..|.:.||        :||   ..:.:::..|:    .
Zfish   137 FKNIMDFVQKTFKCCGGTEYQDWEVNMYHNCSAPGPLACAAPYTCCIVTPGEVVNTMCGY----K 197

  Fly   182 ALGKDKY------FQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIV 224
            .|.||::      :..||...:...:..|...:.|:.:||...|..|::
Zfish   198 TLNKDRHENTDVIYIRGCTDAVFIWLIDNYKTMAGLLLGIFLPQFFGVI 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 61/239 (26%)
tetraspanin_LEL <134..205 CDD:351888 19/92 (21%)
tspan15NP_001017773.1 Tetraspanin 16..>153 CDD:459767 41/140 (29%)
penumbra_like_LEL 110..227 CDD:239411 23/122 (19%)

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