DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13204 and CG11504

DIOPT Version :10

Sequence 1:NP_610678.1 Gene:CG13204 / 36227 FlyBaseID:FBgn0033627 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_651758.1 Gene:CG11504 / 43557 FlyBaseID:FBgn0039733 Length:410 Species:Drosophila melanogaster


Alignment Length:356 Identity:67/356 - (18%)
Similarity:119/356 - (33%) Gaps:92/356 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DYKNVEVKLKVWTQIADEIG--LSVEASKRKWKNLRDSYTKYLRSFRVGTKTSKKYQY---WAHA 99
            :|:..:||.::..:::..:|  :.:...::|:..||..|.:.:      ::..:|..|   |...
  Fly    28 EYRKKDVKQRLLNEVSQVLGGNIPINELEKKFHTLRTQYHREI------SRMKRKEPYNSKWFGF 86

  Fly   100 DHMDFL-KPF-------------QGP------GRNSANGNGKS----NDEDDTECDFGYQVLAKA 140
            .::.|| .|:             ||.      |..:|:.|..|    |...:|..:...:.|.|.
  Fly    87 KNLVFLSSPYACRSTKGRLKADLQGDERKFVLGEVTADHNSDSSTPANHNSNTNANMNEEYLRKN 151

  Fly   141 ASNGGEDELKITIATASAGCSSMGTHTV---NTYTTALSSTSASGITSSLGATTPP--NMISPGS 200
            .::....||:..|...:.....:....:   ..........|...::.:....|.|  |......
  Fly   152 HASSRAQELEKLIEETTKDVDDIDESELEEGEVKPKQAKEMSVRFVSLNEQEETEPLENHHQTLM 216

  Fly   201 NLGGTGGGSGSVGPQIHNSNSNGSATGSLNCAAVAPLSSMTPPATSGSNSAVVLPLPI------- 258
            :|...|....:|..|.:.|       |.|:       ...||..::||:|..|:|..|       
  Fly   217 DLHHQGNAVEAVSFQANES-------GELH-------YQTTPTQSTGSSSVHVMPTRIIKIQRRD 267

  Fly   259 ----------------------------SPAS-SVAAAAAAVSKANANALASLANHLPMGLGVSG 294
                                        |||| :..:..:...:::||..||.......|:.:|.
  Fly   268 TSSGQEDSYFEEHTQLHPPPVKRMYYEASPASHNTTSILSPALESSANGTASSVLTTSPGITMSN 332

  Fly   295 LAQQMFPLATLKAAAVAAGLPLPPTIT--PP 323
            |...........|.|.|...|.||||.  ||
  Fly   333 LRLPKVNTPPKPAQAQAIPSPPPPTIVSLPP 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13204NP_610678.1 MADF 22..108 CDD:214738 13/73 (18%)
BESS 478..510 CDD:460758
CG11504NP_651758.1 MADF_DNA_bdg 11..92 CDD:463144 11/69 (16%)
Blue background indicates that the domain is not in the aligned region.

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