DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13204 and CG3919

DIOPT Version :9

Sequence 1:NP_610678.1 Gene:CG13204 / 36227 FlyBaseID:FBgn0033627 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001261840.1 Gene:CG3919 / 39582 FlyBaseID:FBgn0036423 Length:318 Species:Drosophila melanogaster


Alignment Length:111 Identity:29/111 - (26%)
Similarity:55/111 - (49%) Gaps:14/111 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IVKKYDVVYNNHNPDYKNVEVKLKVWTQIADEIGLSVEASKRKWKNLRDSYTKYLRSFRVGTKTS 90
            :||.:..:|:.|:.:|.........|.:|::|:..||::.|.:|:|:|.||.:.:: ...|..| 
  Fly    24 LVKLHPCLYDRHDDNYLRKSTVKNAWKEISNEMRNSVKSCKERWRNIRSSYARSIK-LHHGANT- 86

  Fly    91 KKYQYWAHADHMDFLKPFQGP-------GRNSANGNGKSNDEDDTE 129
                |:.::: :.||:....|       ||.|.....:.:||.|.|
  Fly    87 ----YYLNSE-LKFLQKHITPGVPVPLRGRRSRPKGQEEHDEGDPE 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13204NP_610678.1 MADF 22..108 CDD:214738 21/81 (26%)
BESS 478..510 CDD:281011
CG3919NP_001261840.1 MADF 20..100 CDD:214738 21/82 (26%)
BESS 226..260 CDD:281011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001895
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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