DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13204 and CG8281

DIOPT Version :10

Sequence 1:NP_610678.1 Gene:CG13204 / 36227 FlyBaseID:FBgn0033627 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_648161.1 Gene:CG8281 / 38880 FlyBaseID:FBgn0035824 Length:348 Species:Drosophila melanogaster


Alignment Length:235 Identity:56/235 - (23%)
Similarity:86/235 - (36%) Gaps:71/235 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FIEIVKKYDVVYNNHNPDYKNVEVKLKVWTQIAD-----EIGLSVEASKRKWKNLRDSYTKYLR- 81
            ||:..:...|:::....||.|.|.:.:.:.::..     :...:||..|:|...||.:|.|.|: 
  Fly    26 FIQTYRDLPVLWDTSLRDYTNREKRAEAYLRLVPIYHYLKRDATVEDVKKKINTLRTNYRKELKV 90

  Fly    82 ---SFRVGTKTSKKYQYWAHADHMDFLKPFQGPGRNSANGNGKSNDEDDTECDFGYQVLAKAASN 143
               :.|.|:..|.:  .|...: :|||       |||..... .|.....|.:|.:         
  Fly    91 VESALRSGSLHSPR--CWTFQE-LDFL-------RNSEKFLA-VNPAFKNEPNFAF--------- 135

  Fly   144 GGEDELKITIATASAGCSSMGTHTVNTYTTAL--SSTSASGIT--------SSLGATTPP----N 194
             ||          |:.|.|.   .:.:...||  .:..|.|.|        .|.||..||    |
  Fly   136 -GE----------SSNCPSA---FLESQGAALHYPAPRAGGQTPNISEMFHKSFGAPPPPPPATN 186

  Fly   195 MISPGSNLGG------TGGGSGSVGPQIHNSNSNGSATGS 228
            .:..||:...      ||.|:||.|        ...|||:
  Fly   187 HVDYGSSKRARQTPPCTGAGAGSTG--------GPGATGT 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13204NP_610678.1 MADF 22..108 CDD:214738 23/93 (25%)
BESS 478..510 CDD:460758
CG8281NP_648161.1 MADF_DNA_bdg 26..114 CDD:463144 21/90 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.