DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13204 and CG4404

DIOPT Version :10

Sequence 1:NP_610678.1 Gene:CG13204 / 36227 FlyBaseID:FBgn0033627 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster


Alignment Length:276 Identity:54/276 - (19%)
Similarity:97/276 - (35%) Gaps:87/276 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FIEIVKKYDVVYNNHNPDYKNVEVKLKVWTQIADEIGLSVEASKRKWKNLRDSYTKYLRSFRVGT 87
            |::.|:....::|..:|.|...|...:.|.|:|::|..:|...:.:|:.:|.|:.:.|:..|..|
  Fly    18 FVQFVENQPCLWNYTHPGYSKKEDVQRAWQQVANDIKDTVRNCRERWRTIRSSFLRSLKLARTQT 82

  Fly    88 KTSKKYQYWAHADHMDFLKPF--------QGPGRNSAN-GNGKSNDEDDTECDFGYQVLA---KA 140
            ...|:..|.  :.::.||.||        |.||..... |...:..::|       :|:|   :|
  Fly    83 GRGKRKYYL--SKYLQFLVPFTKSRSCHKQLPGMVLRKPGQAATAQQED-------EVVAAEEEA 138

  Fly   141 ASNGGEDELKITIATAS------------AGCSSMGTHTVN---------------TYTTALSST 178
            ..:.||..|.:.::...            ..|..:..|::.               ....:|.|.
  Fly   139 KVSDGEMPLDVQVSEEEHRRNQEQDREQPTACLPLRLHSIKVEHDSSNANQQLERMVSQQSLVSV 203

  Fly   179 SASGITSSLG------------------------ATTPPNMISPGSN-----LGGTGGGSG---- 210
            .|:.:.:.||                        .|:||....|.::     .||.|||..    
  Fly   204 PAAALGNHLGWSDLTQWFKGHGSGHHKLTTTTTTPTSPPPPPQPATSALSVFTGGPGGGGSQPDA 268

  Fly   211 ------SVGPQIHNSN 220
                  |:.|.|...|
  Fly   269 DYSFLISLHPYIKEMN 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13204NP_610678.1 MADF 22..108 CDD:214738 21/84 (25%)
BESS 478..510 CDD:460758
CG4404NP_572838.2 MADF 17..103 CDD:214738 23/86 (27%)
BESS 267..301 CDD:460758 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.

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