DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13204 and madf-3

DIOPT Version :9

Sequence 1:NP_610678.1 Gene:CG13204 / 36227 FlyBaseID:FBgn0033627 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_494766.1 Gene:madf-3 / 186755 WormBaseID:WBGene00019218 Length:312 Species:Caenorhabditis elegans


Alignment Length:103 Identity:29/103 - (28%)
Similarity:45/103 - (43%) Gaps:12/103 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IEIVKKYDVVYNNHNPDYKNVEVKLKVWTQIADEIGLSVEAS--KRKWKNLRDSYTKYLRSFRVG 86
            ||.|:....:::|.:..|:|.|.|.:||.::...:|...:..  ..:||.|||.|.|..|..:.|
 Worm    11 IEAVRHSRCLFDNTDRQYRNTEYKNRVWQRLVTVLGFDGDPRMLSARWKQLRDKYGKEKRKQKYG 75

  Fly    87 TKTSKKYQYWAHADHMDFLKPFQ------GPGRNSANG 118
            .:.|.    |.:..|:.||.|..      .|.|....|
 Worm    76 NEKSS----WQYFKHLHFLDPHMTDRAEISPSRKEPTG 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13204NP_610678.1 MADF 22..108 CDD:214738 25/85 (29%)
BESS 478..510 CDD:281011
madf-3NP_494766.1 MADF 9..94 CDD:214738 26/86 (30%)
MADF 122..212 CDD:214738
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001895
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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