DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment iotaTry and LOC100498083

DIOPT Version :10

Sequence 1:NP_523695.1 Gene:iotaTry / 36223 FlyBaseID:FBgn0015001 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_012810073.2 Gene:LOC100498083 / 100498083 XenbaseID:XB-GENE-29084027 Length:243 Species:Xenopus tropicalis


Alignment Length:255 Identity:88/255 - (34%)
Similarity:137/255 - (53%) Gaps:29/255 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLVLLLLGDASDVEATGRIIGGSDQLIRNAPWQVSIQISARHECGGVIYSKEIIITAGHCLHERS 74
            :|:.:|||.|:..: ..:||||:.....:.|:.||:. :..|.|||.:.:.:.:::|.|| ::.|
 Frog     4 LLICVLLGAAAAFD-DDKIIGGATCAKNSVPYIVSLN-AGYHFCGGSLINNQWVVSAAHC-YQAS 65

  Fly    75 VTLMKVRVGAQNHNYG---GTLVPVAAYKV--HEQFDSRFLHYDIAVLRLSTPLTFGLSTRAINL 134
            |   :||:|  .||..   ||...:.:.||  |..::||.|..||.:::||:..:...:..|:.|
 Frog    66 V---QVRLG--EHNIAVSEGTEQFINSAKVIRHSGYNSRTLDNDIMLIKLSSAASLNSAVNAVAL 125

  Fly   135 ASTSPSGGTTVTVTGWGHTDNGALS--DSLQKAQLQIIDRGECASQKFGYGADFVGEET---ICA 194
            .|:..:.||:..::|||:|.....:  :.||.....|:...:|:      || :.|:.|   .||
 Frog   126 PSSCAAAGTSCLISGWGNTSASGSNYPNLLQCLNAPILTTAQCS------GA-YPGQITNNMFCA 183

  Fly   195 ASTDA--DACTGDSGGPLVASSQLVGIVSWGYRCADDNYPGVYADVAILRPWIVK--AAN 250
            ...:.  |:|.||||||:|.:.||.||||||..||..||||||..|.....||..  |||
 Frog   184 GFLEGGKDSCQGDSGGPVVCNGQLQGIVSWGIGCAQRNYPGVYTKVCNYNSWIQSTIAAN 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iotaTryNP_523695.1 Tryp_SPc 27..245 CDD:214473 78/229 (34%)
LOC100498083XP_012810073.2 Tryp_SPc 21..239 CDD:238113 80/231 (35%)

Return to query results.
Submit another query.