DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTry and tmprss4a

DIOPT Version :9

Sequence 1:NP_725034.1 Gene:gammaTry / 36221 FlyBaseID:FBgn0010359 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_005157547.1 Gene:tmprss4a / 777630 ZFINID:ZDB-GENE-061103-631 Length:458 Species:Danio rerio


Alignment Length:283 Identity:104/283 - (36%)
Similarity:137/283 - (48%) Gaps:55/283 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CALGGTVPE--------------------------GLLPQLDGRIVGGSATTISSFPWQISLQRS 51
            |.:|.|.|:                          ||....| |||||....|:::|||:|||.|
Zfish   181 CMVGTTKPQTFQSAVSDRKVCSTGTVISLSCSADCGLSRNQD-RIVGGKDADIANWPWQVSLQYS 244

  Fly    52 GSHSCGGSIYSSNVIVTAAHCLQSVSASVLQIRAGSSYWS-SGGVTFSVSSFKNHEGYNANTMVN 115
            |.|:||||:.:.|.:||||||........|      |.|: ..|:|:..|:   ...|....:||
Zfish   245 GQHTCGGSLVTPNWVVTAAHCFNGDGRKAL------SRWTVVSGITYLSST---PSSYVKEIIVN 300

  Fly   116 ----------DIAIIKINGALTFSSTIKAIGLASSNPA--NGAAASVSGWGTLSYGSSSIPSQLQ 168
                      ||.:||:...:|.|.:.:.:.|...|..  .|....|:|||.::....|:.|.||
Zfish   301 SNYKPAESDFDITMIKLQSPITLSESRRPVCLPPQNLGLKGGDGLVVTGWGHMAEKGGSLSSMLQ 365

  Fly   169 YVNVNIVSQSQCASSTYGYGSQIRSTMICAA--ASGKDACQGDSGGPLV---SGGVLVGVVSWGY 228
            ...:.::..:||:|.|. |||.|...||||.  |.|.||||||||||||   ...|||||||||.
Zfish   366 KAQIQVIDSAQCSSPTV-YGSSITPRMICAGVMAGGVDACQGDSGGPLVHLADRWVLVGVVSWGV 429

  Fly   229 GCAYSNYPGVYADVAALRSWVIS 251
            |||...:||||.:|..:..|..|
Zfish   430 GCARPGFPGVYTNVDQMLDWAHS 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTryNP_725034.1 Tryp_SPc 30..249 CDD:214473 95/236 (40%)
tmprss4aXP_005157547.1 LDLa 74..105 CDD:238060
SRCR_2 121..218 CDD:295335 5/36 (14%)
Tryp_SPc 223..449 CDD:214473 95/235 (40%)
Tryp_SPc 224..449 CDD:238113 94/234 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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