DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTry and cfd

DIOPT Version :9

Sequence 1:NP_725034.1 Gene:gammaTry / 36221 FlyBaseID:FBgn0010359 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001018368.1 Gene:cfd / 553553 ZFINID:ZDB-GENE-050522-411 Length:249 Species:Danio rerio


Alignment Length:228 Identity:74/228 - (32%)
Similarity:121/228 - (53%) Gaps:14/228 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IVGGSATTISSFPWQISLQRSGSHSCGGSIYSSNVIVTAAHCLQSVSASVLQIRAGSSYWSSGGV 95
            |.||......|.|:..|:|.:|.|.|||.:.||..:::||||.|....|.:::..|:.  |..|.
Zfish    21 ITGGQEAKAHSRPYMASVQWNGKHECGGFLISSQWVMSAAHCFQDGRTSGVKVVLGAH--SLSGA 83

  Fly    96 -----TFSVSSFKNHEGYNANTMVNDIAIIKINGALTFSSTIKAIGL---ASSNPANGAAASVSG 152
                 ||....: ||..::.:...||||:||::..:|.|..:|.:..   .:::|...|....:|
Zfish    84 EDTKQTFDAEVY-NHPDFSISNYDNDIALIKLDKPVTQSDAVKPVKFQRDETADPKEAAVVETAG 147

  Fly   153 WGTLSYGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRSTMICAAASGKDACQGDSGGPLVSG 217
            ||:|: .....|.:|..:::.::.:.:|..:.: ||.:..|.|:|||...||.|.|||||||:..
Zfish   148 WGSLN-NMGGRPDKLHELSIPVMERWRCGRADF-YGEKFTSNMLCAADKRKDTCDGDSGGPLLYR 210

  Fly   218 GVLVGVVS-WGYGCAYSNYPGVYADVAALRSWV 249
            |::||:.| .|..|..|..||:|..::...||:
Zfish   211 GIVVGITSNGGKKCGSSRKPGLYTIISHYASWI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTryNP_725034.1 Tryp_SPc 30..249 CDD:214473 73/226 (32%)
cfdNP_001018368.1 Tryp_SPc 21..246 CDD:238113 74/228 (32%)
Tryp_SPc 21..243 CDD:214473 73/226 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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