DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTry and tmprss2

DIOPT Version :9

Sequence 1:NP_725034.1 Gene:gammaTry / 36221 FlyBaseID:FBgn0010359 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001008623.1 Gene:tmprss2 / 494080 ZFINID:ZDB-GENE-041212-48 Length:486 Species:Danio rerio


Alignment Length:291 Identity:109/291 - (37%)
Similarity:145/291 - (49%) Gaps:60/291 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LSAVACALGG-----TVPEGLL-PQLD-----------------------GRIVGGSATTISS-- 41
            |:..|||..|     :..:|:| |.||                       .|||||  ||::|  
Zfish   200 LAKQACAEIGYKDTYSGYQGILSPSLDFISACQSSTAVSLKCTDCGRSTGNRIVGG--TTVTSKG 262

  Fly    42 -FPWQISLQRSGSHSCGGSIYSSNVIVTAAHCLQSVS-ASVLQIRAG----SSYWSSGGVTFSVS 100
             :|||:||..||.|.|||||.:...|:|||||:...| .....:.||    |...|:.|  .||:
Zfish   263 VWPWQVSLHYSGRHLCGGSIITPYWILTAAHCVHQFSNPGGWTVYAGYLTQSEMASASG--NSVN 325

  Fly   101 SFKNHEGYNANTMVNDIAIIKINGALTFSSTIKAIGLASSNPANGAAAS------VSGWGTLSYG 159
            ....|: :|.||..||||::::|.|||.|:.|:.:.|    |..|.:.:      |:|||.|..|
Zfish   326 RIVIHD-FNPNTNENDIALMRLNTALTISTNIRPVCL----PNKGMSFTAQQDCYVTGWGALFSG 385

  Fly   160 SSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRSTMICAA--ASGKDACQGDSGGPLVSG----G 218
            .|| .:.||...:.::..:.|.|... |...|..|||||.  |.|.|:||||||||||:.    .
Zfish   386 GSS-SATLQEAKIQLIDSTICNSRPV-YNGLITDTMICAGKLAGGVDSCQGDSGGPLVTNVRSLW 448

  Fly   219 VLVGVVSWGYGCAYSNYPGVYADVAALRSWV 249
            .|:|..|||.|||..|.||||.:|.....|:
Zfish   449 WLLGDTSWGDGCAVRNKPGVYGNVTYFLDWI 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTryNP_725034.1 Tryp_SPc 30..249 CDD:214473 98/238 (41%)
tmprss2NP_001008623.1 LDLa 132..168 CDD:238060
SRCR_2 173..248 CDD:295335 10/47 (21%)
Tryp_SPc 251..479 CDD:214473 98/238 (41%)
Tryp_SPc 252..482 CDD:238113 98/239 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X21
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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