DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gammaTry and ela2

DIOPT Version :9

Sequence 1:NP_725034.1 Gene:gammaTry / 36221 FlyBaseID:FBgn0010359 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001132936.1 Gene:ela2 / 403061 ZFINID:ZDB-GENE-041117-1 Length:266 Species:Danio rerio


Alignment Length:264 Identity:94/264 - (35%)
Similarity:135/264 - (51%) Gaps:21/264 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKFVILLSAVACALGGTVPEGLLPQLDGRIVGGSATTISSFPWQISLQ-RSGS---HSCGGSIYS 62
            :|.|||...:|.|.|...|  ....:|.|:||||....:|:|||.||| :|||   |:|||::..
Zfish     1 MKLVILALFIAGAYGCGQP--TYKPIDSRVVGGSDVRPNSWPWQASLQYQSGSSFYHTCGGTLID 63

  Fly    63 SNVIVTAAHCLQSVSASVLQIRAGSSYWS-SGGVTFSVSSFKNHEGYNANTMVNDIAIIKINGAL 126
            ...::|||||:.|.:..||..:......| ||....|.:....||.:::..:.||||:||::..:
Zfish    64 KQWVLTAAHCISSRTYRVLLGKHNLPLSSESGSQAISPARIIVHENWDSYNIRNDIALIKLSTPV 128

  Fly   127 TFSSTIKAIGLASSN---PANGAAASVSGWGTLSYGSSSIPSQLQYVNVNIVSQSQCASSTYGYG 188
            ||:..|....|..|.   |.| :...|:|||.|..| ..|...||...:.||.|:.|..|.: :|
Zfish   129 TFTDKISPACLPDSGSILPHN-SPCYVTGWGRLWTG-GPIADILQQALLPIVDQATCTKSDW-WG 190

  Fly   189 SQIRSTMICAAASG-KDACQGDSGGPL---VSGGV--LVGVVSWG--YGCAYSNYPGVYADVAAL 245
            :.:...|:||...| ..:|.|||||||   ...|.  :.|:||:|  .||.|...|.|:..|:..
Zfish   191 NLVTDLMVCAGGDGVVSSCNGDSGGPLNCQRRDGTWDVHGIVSFGSSLGCNYPKKPSVFTRVSGY 255

  Fly   246 RSWV 249
            ..|:
Zfish   256 IPWI 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTryNP_725034.1 Tryp_SPc 30..249 CDD:214473 84/234 (36%)
ela2NP_001132936.1 Tryp_SPc 27..259 CDD:214473 84/234 (36%)
Tryp_SPc 28..262 CDD:238113 84/235 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.