DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment gammaTry and Gzma

DIOPT Version :9

Sequence 1:	NP_725034.1	Gene:	gammaTry / 36221	FlyBaseID:	FBgn0010359	Length:	253	Species:	Drosophila melanogaster
Sequence 2:	NP_703198.1	Gene:	Gzma / 266708	RGDID:	628640	Length:	261	Species:	Rattus norvegicus

Alignment Length:	231	Identity:	64/231 - (27%)
Similarity:	107/231 - (46%)	Gaps:	19/231 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly    19 VPEGLLPQLDG--RIVGGSATTISSFPWQISLQRSGSHSCGGSIYSSNVIVTAAHCLQSVSASVL 81
            :|||      |  ||:||......|.|:.:.|:......|.|::.:.|.::|||||:....:.|:
  Rat    21 IPEG------GCERIIGGDTVVPHSRPYMVLLKLKPDSICAGALIAKNWVLTAAHCIPGKKSEVI 79

  Fly    82 QIRAGSSYWSSGGVTFSVSSFKNHEGYNANTMVNDIAIIKINGALTFSSTIKAIGL--ASSNPAN 144
             :.|.|..........||.....:..::.:|...|:.::::....|.:..:..:.|  ...:...
  Rat    80 -LGAHSIKKEPEQQILSVKKAYPYPCFDKHTHEGDLQLLRLKKKATLNKNVAILHLPKKGDDVKP 143

  Fly   145 GAAASVSGWGTLSYGSSSIPSQ-LQYVNVNIVSQSQCASST-YGYGSQIRSTMICAA--ASGKDA 205
            |....|:|||  .:.:.|.||. |:.||:.::.:..|.... |.:...|...||||.  ..|||:
  Rat   144 GTRCHVAGWG--RFHNKSPPSDTLREVNITVIDRKICNDEKHYNFNPVIGLNMICAGNLRGGKDS 206

  Fly   206 CQGDSGGPLVSGGVLVGVVSWGY--GCAYSNYPGVY 239
            |.|||||||:..|:..|:.::|.  .|.....||:|
  Rat   207 CYGDSGGPLLCEGIFRGITAFGLEGRCGDPKGPGIY 242

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
gammaTry	NP_725034.1	Tryp_SPc	30..249	CDD:214473	60/218 (28%)
Gzma	NP_703198.1	Tryp_SPc	28..253	CDD:214473	60/218 (28%)
Gzma	NP_703198.1	Tryp_SPc	29..256	CDD:238113	59/217 (27%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X21
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910