DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gammaTry and Try5

DIOPT Version :9

Sequence 1:NP_725034.1 Gene:gammaTry / 36221 FlyBaseID:FBgn0010359 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_008761147.1 Gene:Try5 / 103690254 RGDID:1560283 Length:246 Species:Rattus norvegicus


Alignment Length:254 Identity:93/254 - (36%)
Similarity:140/254 - (55%) Gaps:21/254 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKFVILLSAVACALGGTVPEGLLPQLDGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSSNVI 66
            ::.::.|:.|..|:...:.:      |.:||||.....:|.|:|:|| .||.|.||||:.:...:
  Rat     1 MRALLFLAHVGAAVAFPIDD------DDKIVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWV 58

  Fly    67 VTAAHCLQSVSASVLQIRAGSSYWS--SGGVTF-SVSSFKNHEGYNANTMVNDIAIIKINGALTF 128
            |:||||.:    |.:|:|.|....:  .|...| :.:....|..:||..:.|||.:||::..:|.
  Rat    59 VSAAHCYK----SRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFNARNLNNDIMLIKLSVPVTL 119

  Fly   129 SSTIKAIGLASSNPANGAAASVSGWG-TLSYGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIR 192
            :|.:..:.|.||....|....:|||| |||.|.:: |..||.::..::.|:.|.:|   |..:|.
  Rat   120 NSRVATVALPSSCAPAGTQCLISGWGNTLSLGVNN-PDLLQCLDAPVLPQADCEAS---YPGKIT 180

  Fly   193 STMICAA--ASGKDACQGDSGGPLVSGGVLVGVVSWGYGCAYSNYPGVYADVAALRSWV 249
            :.|||..  ..|||:||||||||:|..|.|.|:||||||||..:.||||..|.....|:
  Rat   181 NNMICVGFLEGGKDSCQGDSGGPVVCNGQLQGIVSWGYGCALKDNPGVYTKVCNYVDWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTryNP_725034.1 Tryp_SPc 30..249 CDD:214473 88/224 (39%)
Try5XP_008761147.1 Tryp_SPc 23..239 CDD:214473 88/224 (39%)
Tryp_SPc 24..242 CDD:238113 89/225 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 152 1.000 Inparanoid score I4263
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8948
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X21
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.870

Return to query results.
Submit another query.