DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment thetaTry and LOC560023

DIOPT Version :9

Sequence 1:NP_523693.1 Gene:thetaTry / 36218 FlyBaseID:FBgn0011555 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_021325702.1 Gene:LOC560023 / 560023 -ID:- Length:271 Species:Danio rerio


Alignment Length:237 Identity:84/237 - (35%)
Similarity:120/237 - (50%) Gaps:19/237 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DPFEREGRIVGGEDTTIGAHPYQVSLQTKSGSHFCGGSLINEDTVVTAAHCLVGRKVSKVFVRLG 91
            |.|.:  ||:||::....:..||||||. ...|||||:||....|:|||||.....|.:|.:...
Zfish    38 DAFSQ--RIIGGQEVVPYSIKYQVSLQV-DRKHFCGGTLIQPQWVLTAAHCWRPASVIQVVLSEH 99

  Fly    92 STLYNEG-GIVVAVRELAYNEDYNSKTMEYDVGILKLDEKVKETENIRYIELATETPPT---GTT 152
            :....|| ..|..|.::..:..||.||...|:.|:||....:....::...|.|...|.   |::
Zfish   100 NLAVEEGFEQVCTVAKVFSHVAYNPKTFNNDIMIIKLTAPAQINAYVQPALLPTADTPELAGGSS 164

  Fly   153 AVVTGWG-SKCY-FWCMTLPKTLQEVYVNIVDWKTCASDEYKYGEIIYDSMVCAYEK--KKDACQ 213
            ..|:||| ::.| |:...:        :..||.:..:|.:..|...:.|:|:||..:  .||:||
Zfish   165 CTVSGWGVTRLYNFYLSPI--------LRAVDVEIFSSCQLYYYYRVNDNMICAGSRFGGKDSCQ 221

  Fly   214 GDSGGPLAVGNTLVGIVSWGYACASNLLPGVYSDVPALRKWI 255
            |||||||.....|.||||||..||....||||:.|....:||
Zfish   222 GDSGGPLICDGYLEGIVSWGIGCALPYYPGVYTKVRNYNRWI 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thetaTryNP_523693.1 Tryp_SPc 34..255 CDD:214473 80/228 (35%)
Tryp_SPc 35..255 CDD:238113 79/227 (35%)
LOC560023XP_021325702.1 Tryp_SPc 43..263 CDD:214473 80/228 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X21
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.