DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment thetaTry and Tmprss4

DIOPT Version :10

Sequence 1:NP_523693.1 Gene:thetaTry / 36218 FlyBaseID:FBgn0011555 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:271 Identity:94/271 - (34%)
Similarity:129/271 - (47%) Gaps:45/271 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VVLLVCLAVGSACAGTVGVSNGDPFEREGRIVGGEDTTIGAHPYQVSLQTKSGSHFCGGSLINED 69
            :|.|.||..|.:...|             |:|||.:.:..:.|:|||:|... .|.||||:::..
  Rat   229 LVSLRCLDCGKSLKTT-------------RVVGGVEASADSWPWQVSIQYNK-QHVCGGSILDHH 279

  Fly    70 TVVTAAHCLVGRK---VSKVFVRLGST-LYNEGGIVVAVRELAYNEDYNSKTMEYDVGILKLDEK 130
            .::|||||.  ||   ||...||.||. |.|...:.||...:|.......|  |.|:.::||...
  Rat   280 WILTAAHCF--RKYLDVSSWKVRAGSNKLGNSPSLPVAKIFIAEPNPLQPK--EKDIALVKLKMP 340

  Fly   131 VKETENIRYIELA---TETPPTGTTAVVTGW------GSKCYFWCMTLPKTLQEVYVNIVDWKTC 186
            :..:.::|.|.|.   .|..||....|: ||      |.|       :..||.:..|.::|...|
  Rat   341 LTFSGSVRPICLPFSDEELIPTMPVWVI-GWGFTEENGGK-------MSDTLLQASVQVIDSARC 397

  Fly   187 ASDEYKYGEIIYDSMVCAYEKK--KDACQGDSGGPLAVGN---TLVGIVSWGYACASNLLPGVYS 246
            .:::...||:. ..|:||...:  ||.|||||||||....   .:||||||||.|.|...||||:
  Rat   398 NAEDAYQGEVT-AGMLCAGTPQGGKDTCQGDSGGPLMYHYDKWQVVGIVSWGYGCGSPSTPGVYT 461

  Fly   247 DVPALRKWILN 257
            .|.|...||.|
  Rat   462 KVTAYLDWIYN 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thetaTryNP_523693.1 Tryp_SPc 34..255 CDD:214473 85/238 (36%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597 4/8 (50%)
Tryp_SPc 245..470 CDD:214473 85/238 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.