DRSC/TRiP Functional Genomics Resources

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Protein Alignment thetaTry and F12

DIOPT Version :10

Sequence 1:NP_523693.1 Gene:thetaTry / 36218 FlyBaseID:FBgn0011555 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:241 Identity:83/241 - (34%)
Similarity:118/241 - (48%) Gaps:23/241 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIVGGEDTTIGAHPYQVSLQTKSGSHFCGGSLINEDTVVTAAHCLVGRKV-SKVFVRLGSTLYN- 96
            |:|||.....|:|||..:|..  |..||.||||:...|:||||||..|.. .::.|.||...:| 
  Rat   361 RVVGGLVALPGSHPYIAALYW--GDSFCAGSLIDPCWVLTAAHCLQKRPAPEELTVVLGQDRHNQ 423

  Fly    97 --EGGIVVAVRELAYNEDYNSKTMEYDVGILKLDEKVKE----TENIRYIELATETPPTGTTAV- 154
              |....:||.....:|.::|||.::|:.:|:|..:...    :.:::.:.|.:...|...|.: 
  Rat   424 SCERCQTLAVHSYRLHEGFSSKTYQHDLALLRLRGRKNSCAILSPHVQPVCLPSSAAPPSETVLC 488

  Fly   155 -VTGWGSKCYFWCMTLPKTLQEVYVNIVDWKTCASDEYKYGEIIYDSMVCA--YEKKKDACQGDS 216
             |.|||.: :.........|||..|..:....|:|... :|:.|...|:||  .|...|||||||
  Rat   489 EVAGWGHQ-FEGAEEYATFLQEAQVPFISLDRCSSSNV-HGDAILPGMLCAGFLEGGADACQGDS 551

  Fly   217 GGPLAVGN-------TLVGIVSWGYACASNLLPGVYSDVPALRKWI 255
            ||||....       ||.|::|||..|.....||||:||.....||
  Rat   552 GGPLVCDEGVTERQLTLRGVISWGSGCGDRNKPGVYTDVANYLDWI 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thetaTryNP_523693.1 Tryp_SPc 34..255 CDD:214473 81/239 (34%)
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:394967
Kringle 216..294 CDD:395005
Tryp_SPc 362..600 CDD:238113 82/240 (34%)
Blue background indicates that the domain is not in the aligned region.

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