DRSC/TRiP Functional Genomics Resources

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Protein Alignment thetaTry and Ctrb1

DIOPT Version :10

Sequence 1:NP_523693.1 Gene:thetaTry / 36218 FlyBaseID:FBgn0011555 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_036668.2 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:262 Identity:106/262 - (40%)
Similarity:135/262 - (51%) Gaps:24/262 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLVCLAVGSACAGTVGVSNGDP-FEREGRIVGGEDTTIGAHPYQVSLQTKSGSHFCGGSLINEDT 70
            ||.|.|:..|..| .||....| .....|||.|||...|:.|:|||||.|:|.||||||||:||.
  Rat     6 LLSCFALVGATFG-CGVPTIQPVLTGLSRIVNGEDAIPGSWPWQVSLQDKTGFHFCGGSLISEDW 69

  Fly    71 VVTAAHCLVGRKVSKVFVR----LGSTLYNEGGI-VVAVRELAYNEDYNSKTMEYDVGILKLDEK 130
            |||||||  |.|.|.|.|.    .||   :|..| |:.:.::..|..:|..|:..|:.:|||...
  Rat    70 VVTAAHC--GVKTSDVVVAGEFDQGS---DEENIQVLKIAQVFKNPKFNMFTVRNDITLLKLATP 129

  Fly   131 VKETENIRYIELAT---ETPPTGTTAVVTGWGSKCYFWCMTLPKTLQEVYVNIVDWKTCASDEYK 192
            .:.:|.:..:.|..   :.|| ||....|||| |..:..:..|:.||:..:.||....|   :..
  Rat   130 AQFSETVSAVCLPNVDDDFPP-GTVCATTGWG-KTKYNALKTPEKLQQAALPIVSEADC---KKS 189

  Fly   193 YGEIIYDSMVCAYEKKKDACQGDSGGPLAVGN----TLVGIVSWGYACASNLLPGVYSDVPALRK 253
            :|..|.|.|:||......:|.|||||||....    ||.||||||....|...|.|||.|.||..
  Rat   190 WGSKITDVMICAGASGVSSCMGDSGGPLVCQKDGVWTLAGIVSWGSGVCSTSTPAVYSRVTALMP 254

  Fly   254 WI 255
            |:
  Rat   255 WV 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thetaTryNP_523693.1 Tryp_SPc 34..255 CDD:214473 96/232 (41%)
Ctrb1NP_036668.2 Tryp_SPc 34..259 CDD:238113 96/233 (41%)

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