DRSC/TRiP Functional Genomics Resources

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Protein Alignment thetaTry and svh-1

DIOPT Version :10

Sequence 1:NP_523693.1 Gene:thetaTry / 36218 FlyBaseID:FBgn0011555 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:240 Identity:71/240 - (29%)
Similarity:113/240 - (47%) Gaps:21/240 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 REGRIVGGEDTTIGAHPYQVSLQTK-SGSHFCGGSLINEDTVVTAAHCL-VGRKVSKVFVRLGST 93
            |..|:|||.:|..||.|:..:|:.| :.:|.||.|::::..::|||||. ...:||...|.:|..
 Worm   709 RIARVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDW 773

  Fly    94 LYN--EGGIVVAVRELAYNEDYNSKTMEYDVGILKLD-EKVKETENIRYIELATE----TPPTGT 151
            ..|  :|...:...:..:..........:|:.||::. ..::..|..:.|.|.::    ||  |.
 Worm   774 DNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTP--GR 836

  Fly   152 TAVVTGWGSKCYFWCMTLPKTLQEVYVNIVDWKTCASDEYKYGEIIYDSMVCAY-EKKKDACQGD 215
            ..||:||||    ..:...:.||...:.|::...|.:....|..:...:....| |...|:||||
 Worm   837 QCVVSGWGS----MGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQGD 897

  Fly   216 SGGPLAVGN-----TLVGIVSWGYACASNLLPGVYSDVPALRKWI 255
            ||||.|...     .|.|::|||..||....||:|:.|.....||
 Worm   898 SGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thetaTryNP_523693.1 Tryp_SPc 34..255 CDD:214473 68/235 (29%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 69/236 (29%)
Blue background indicates that the domain is not in the aligned region.

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