DRSC/TRiP Functional Genomics Resources

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Protein Alignment thetaTry and St14

DIOPT Version :10

Sequence 1:NP_523693.1 Gene:thetaTry / 36218 FlyBaseID:FBgn0011555 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:277 Identity:86/277 - (31%)
Similarity:129/277 - (46%) Gaps:35/277 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VCLAVGS-ACAGTVGVSNGD----------PFEREGRIVGGEDTTIGAHPYQVSLQTKSGSHFCG 62
            :||..|: .|.|....|:|.          .|.::.|:|||.:...|..|:||||......|.||
  Rat   578 LCLNKGNPECDGKKDCSDGSDEKNCDCGLRSFTKQARVVGGTNADEGEWPWQVSLHALGQGHLCG 642

  Fly    63 GSLINEDTVVTAAHCLVGRKVSK--------VFV-RLGSTLYNEGGIVV-AVRELAYNEDYNSKT 117
            .|||:.|.:|:||||.....:.|        .|: .|..:..:..|:.. .::.:..:..:|..|
  Rat   643 ASLISPDWLVSAAHCFQDETIFKYSDHTMWTAFLGLLDQSKRSASGVQEHKLKRIITHPSFNDFT 707

  Fly   118 MEYDVGILKLDEKVKETENIRYIELATETP--PTGTTAVVTGWGSKCYFWCMTLPKTLQEVYVNI 180
            .:||:.:|:|::..:.:..:|.|.|...|.  |.|....|||||.........|  .||:..:.:
  Rat   708 FDYDIALLELEKPAEYSTVVRPICLPDNTHVFPAGKAIWVTGWGHTKEGGTGAL--ILQKGEIRV 770

  Fly   181 VDWKTCASDEYKYGEIIYDSMVCA--YEKKKDACQGDSGGPLAV----GNTL-VGIVSWGYACAS 238
            ::..||   |....:.|...|:|.  .....|:|||||||||:.    |... .|:||||..||.
  Rat   771 INQTTC---EELLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEKDGRIFQAGVVSWGEGCAQ 832

  Fly   239 NLLPGVYSDVPALRKWI 255
            ...||||:.:|.:|.||
  Rat   833 RNKPGVYTRIPEVRDWI 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thetaTryNP_523693.1 Tryp_SPc 34..255 CDD:214473 76/239 (32%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060 7/23 (30%)
Tryp_SPc 615..852 CDD:238113 77/240 (32%)
Blue background indicates that the domain is not in the aligned region.

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