DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment thetaTry and LOC103908930

DIOPT Version :10

Sequence 1:NP_523693.1 Gene:thetaTry / 36218 FlyBaseID:FBgn0011555 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001373362.1 Gene:LOC103908930 / 103908930 -ID:- Length:243 Species:Danio rerio


Alignment Length:257 Identity:76/257 - (29%)
Similarity:121/257 - (47%) Gaps:31/257 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLLVCLAVGSACAGTVGVSNGDPFEREGRIVGGEDTTIGAHPYQVSLQTKSGSHFCGGSLINEDT 70
            |:...|.|..||:         |.:   :|:||.:....:.|:|:.: |..|..:||.|||||..
Zfish     4 VVFALLVVNVACS---------PVD---KIIGGYECPPNSQPWQIYI-TNDGQRWCGASLINESW 55

  Fly    71 VVTAAHCLVGRKVSKVFVRLGSTLYNEGGIV-----VAVRELAYNEDYNSKTMEYDVGILKLDEK 130
            .|:||||.:|..:..|:  ||.  :|...:.     :...::..:.::...:.:.|:.::||.:.
Zfish    56 AVSAAHCNIGANLLTVY--LGK--HNIDVVEKTEQRIRTEKVFPHPEFKFPSEDNDIMLIKLKDP 116

  Fly   131 VKETENIRYIELATETPPTGTTAVVTGWGSKCYFWCMTLPKTLQEVYVNIVDWKTCASDEYKYGE 195
            ....:.::.|.|||.....|...:|:|||    :..:.||..||.:.:.:...:.|   |..|.:
Zfish   117 AVFNQYVQPIPLATSCSSEGEQCLVSGWG----YTEVGLPSVLQCLDLAVQSRQEC---ERVYKD 174

  Fly   196 IIYDSMVCA--YEKKKDACQGDSGGPLAVGNTLVGIVSWGYACASNLLPGVYSDVPALRKWI 255
            ....:|:||  .|..|..|.|||||||.....|.|:||||..||....|.||.:|.....||
Zfish   175 KFTQNMLCAGFMEGGKGVCHGDSGGPLVCNGELRGVVSWGAGCAEPGYPAVYVEVCRYSDWI 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thetaTryNP_523693.1 Tryp_SPc 34..255 CDD:214473 68/227 (30%)
LOC103908930NP_001373362.1 Tryp_SPc 21..239 CDD:238113 70/228 (31%)

Return to query results.
Submit another query.