DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment thetaTry and LOC100485189

DIOPT Version :10

Sequence 1:NP_523693.1 Gene:thetaTry / 36218 FlyBaseID:FBgn0011555 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_002941065.2 Gene:LOC100485189 / 100485189 XenbaseID:XB-GENE-29077659 Length:249 Species:Xenopus tropicalis


Alignment Length:237 Identity:83/237 - (35%)
Similarity:115/237 - (48%) Gaps:32/237 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIVGGEDTTIGAHPYQVSLQTKSGSHFCGGSLINEDTVVTAAHCLVGRKVSKVFVRLGSTLYNEG 98
            ||:||.:....:.|:..||. ....|.|||.||:|:.|:|||||    ::|.:.||||     |.
 Frog    21 RIIGGTECRPNSQPWHCSLY-YFDQHVCGGVLIDENWVLTAAHC----QLSSLQVRLG-----EH 75

  Fly    99 GIVV--AVRELAYNE------DYNSKTMEYDVGILKLDEKVKETENIRYIELATETPPTGTTAVV 155
            .:.|  ...:.:|.|      .:|..|.:.|:.:|||...|...:.::.|.|...|...|.|.:|
 Frog    76 NLAVYEGKEQFSYAEKMCPHSGFNPITFDNDIMLLKLVSPVTINDYVQTIPLGCPTVGDGETCLV 140

  Fly   156 TGWGSKCYFWCMTLPKTLQEVYVNIVDWKTC----ASDEYKYGEIIYDSMVCA--YEKKKDACQG 214
            :|||:..... .|.|..||.|.|..|....|    .:||      |.|:|:||  .|..||:|||
 Frog   141 SGWGTTTSPE-ETFPDELQCVEVQTVSQDYCQGAFPTDE------ITDNMLCAGVMEGGKDSCQG 198

  Fly   215 DSGGPLAVGNTLVGIVSWGYA-CASNLLPGVYSDVPALRKWI 255
            ||||||...:.:.||.|||.. |.....||:|:.:.....||
 Frog   199 DSGGPLVCNSMVHGITSWGNTPCGVANKPGIYTKICNYIAWI 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thetaTryNP_523693.1 Tryp_SPc 34..255 CDD:214473 81/235 (34%)
LOC100485189XP_002941065.2 Tryp_SPc 22..243 CDD:238113 82/236 (35%)

Return to query results.
Submit another query.