DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment thetaTry and LOC100004427

DIOPT Version :10

Sequence 1:NP_523693.1 Gene:thetaTry / 36218 FlyBaseID:FBgn0011555 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_005163955.1 Gene:LOC100004427 / 100004427 -ID:- Length:302 Species:Danio rerio


Alignment Length:261 Identity:83/261 - (31%)
Similarity:116/261 - (44%) Gaps:39/261 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SACAGTVGVSNGDPFEREGRIVGGEDTTIGAHPYQVSLQTKS-GSHFCGGSLINEDTVVTAAHCL 78
            :.|.|...|....|...  :||||.:.|.|:.|:|.|:..|| |..||.||||:|..|:|||.|.
Zfish    18 AGCLGQSDVCGRAPLNT--KIVGGLNATEGSWPWQASINFKSTGQFFCSGSLISERWVLTAASCF 80

  Fly    79 VGRKVSKVFVRLGSTLYNEGG--------IVVAVRELAYNEDYNSKTMEYDVGILKLDEKVKETE 135
            ....||.|.:.||....|...        |.|:|.|              |:.:::|...|..|:
Zfish    81 QRINVSDVVIYLGRLTTNGSNPYEIPRTVIQVSVTE--------------DIALVQLSSSVTFTD 131

  Fly   136 NIRYIELAT--ETPPTGTTAVVTGWGSKCYFWCMTLPKTLQEVYVNIVDWKTCASDEYKYGEIIY 198
            .||.:.||.  .....||.:.||||||.. ...:.|...|:||...||:...|::..   |....
Zfish   132 YIRPVCLAAAGSVFVDGTESWVTGWGSTS-STNVILSDMLKEVEAPIVNNIECSNIN---GITNL 192

  Fly   199 DSMVCA---YEKKKDACQGDSGGPLAV--GNTLV--GIVSWGYACASNLLPGVYSDVPALRKWIL 256
            |:::||   .|..|..|..|.|.||..  |:..:  |:|.:.: |..|..|.:|:.|....:||.
Zfish   193 DNVICAGFVNETGKAPCWEDFGSPLVTRQGSQWIQSGVVVFTF-CGQNGFPTLYARVSEYEEWIR 256

  Fly   257 N 257
            |
Zfish   257 N 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thetaTryNP_523693.1 Tryp_SPc 34..255 CDD:214473 76/238 (32%)
LOC100004427XP_005163955.1 Tryp_SPc 36..257 CDD:238113 78/239 (33%)

Return to query results.
Submit another query.