DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment etaTry and Send1

DIOPT Version :10

Sequence 1:NP_523692.1 Gene:etaTry / 36217 FlyBaseID:FBgn0011554 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster


Alignment Length:258 Identity:84/258 - (32%)
Similarity:119/258 - (46%) Gaps:38/258 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILAVLFLLG-IYAVSAQSDGRIVGGADTSSYYTKYVVQLRRRSSSSSSYAQ-TCGGCILDAVTIA 70
            :|||..|:. :..|..:...||:||:........:.|.|:       .|.: .|||.|.....|.
  Fly     9 LLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQ-------YYGEHFCGGSIYSKTIII 66

  Fly    71 TAAHCVYNREAENFLVVAGDDSRGGMNGVVVRVSKLIPHELYNSSTMDNDIALVVVDPPLPLDSF 135
            |||||:  :|.|.  .:....|.....||||.|...|.|..::...|:||:|::.:..||   ||
  Fly    67 TAAHCI--KEGER--SIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPL---SF 124

  Fly   136 S-TMEAIEIASEQPAVGVQATISGWGYTKENGL-SSDQLQQVKVPIVDSEKCQEAYYWRPISEGM 198
            | :::.|.:|...|.....|..:|||  :.|.| ...|||.|::.|.....|:..|.....:|. 
  Fly   125 SDSIQTIPLAETDPPTSSSALATGWG--RGNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNED- 186

  Fly   199 LCAGLSEGGKDACQGDSGGPLVVANKLAGIVS-------WGEGCARPNYPGVYANVAYYKDWI 254
            :|||  ..||..|.||||||||...:|.||.|       .|.        .:||:||.|::||
  Fly   187 ICAG--RMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGS--------SLYASVARYRNWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
etaTryNP_523692.1 Tryp_SPc 27..254 CDD:214473 77/236 (33%)
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 77/236 (33%)

Return to query results.
Submit another query.