DRSC/TRiP Functional Genomics Resources

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Protein Alignment etaTry and Ctrb1

DIOPT Version :10

Sequence 1:NP_523692.1 Gene:etaTry / 36217 FlyBaseID:FBgn0011554 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_036668.2 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:272 Identity:88/272 - (32%)
Similarity:134/272 - (49%) Gaps:42/272 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LAVLFLLGIYAVSAQSDG--------------RIVGGADTSSYYTKYVVQLRRRSSSSSSYAQTC 59
            :|.|:||..:|:...:.|              |||.|.|.......:.|.|:.::.     ...|
  Rat     1 MAFLWLLSCFALVGATFGCGVPTIQPVLTGLSRIVNGEDAIPGSWPWQVSLQDKTG-----FHFC 60

  Fly    60 GGCILDAVTIATAAHCVYNREAENFLVVAGDDSRGG--MNGVVVRVSKLIPHELYNSSTMDNDIA 122
            ||.::....:.|||||...   .:.:||||:..:|.  .|..|::::::..:..:|..|:.|||.
  Rat    61 GGSLISEDWVVTAAHCGVK---TSDVVVAGEFDQGSDEENIQVLKIAQVFKNPKFNMFTVRNDIT 122

  Fly   123 LVVVDPPLPLDSFS-TMEAI---EIASEQPAVGVQATISGWGYTKENGLSS-DQLQQVKVPIVDS 182
            |:.:..|.   .|| |:.|:   .:..:.|...|.|| :|||.||.|.|.: ::|||..:|||..
  Rat   123 LLKLATPA---QFSETVSAVCLPNVDDDFPPGTVCAT-TGWGKTKYNALKTPEKLQQAALPIVSE 183

  Fly   183 EKCQEAYYW-RPISEGMLCAGLSEGGKDACQGDSGGPLVVAN----KLAGIVSWGEGCARPNYPG 242
            ..|:::  | ..|::.|:|||.|  |..:|.||||||||...    .||||||||.|....:.|.
  Rat   184 ADCKKS--WGSKITDVMICAGAS--GVSSCMGDSGGPLVCQKDGVWTLAGIVSWGSGVCSTSTPA 244

  Fly   243 VYANVAYYKDWI 254
            ||:.|.....|:
  Rat   245 VYSRVTALMPWV 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
etaTryNP_523692.1 Tryp_SPc 27..254 CDD:214473 81/238 (34%)
Ctrb1NP_036668.2 Tryp_SPc 34..259 CDD:238113 81/239 (34%)

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