DRSC/TRiP Functional Genomics Resources

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Protein Alignment etaTry and svh-1

DIOPT Version :10

Sequence 1:NP_523692.1 Gene:etaTry / 36217 FlyBaseID:FBgn0011554 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:249 Identity:82/249 - (32%)
Similarity:122/249 - (48%) Gaps:37/249 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RIVGGADTSSYYTKYVVQLRRRSSSSSSYAQTCGGCILDAVTIATAAHCVYNRE-AENFLVVAG- 89
            |:|||.:|......:...||.:::.    |..||..|||...:.|||||....| ..::.||.| 
 Worm   712 RVVGGFETVPGAFPWTAALRNKATK----AHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGD 772

  Fly    90 -DDSRGGMNGVVVRVSKLIPHELYNSSTMDNDIALVVVDPPLPLDSFSTMEAIEIASEQP----- 148
             |:::...|..:..:.::..:.|| .....:|||::.:  |.|...|:     |.|  ||     
 Worm   773 WDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEI--PYPGIEFN-----EYA--QPICLPS 827

  Fly   149 -----AVGVQATISGWGYTKENGLS-SDQLQQVKVPIVDSEKC-QEAYYWRPISEGMLCAGLSEG 206
                 ..|.|..:||||   ..||. :::||...:||::...| ..:..:..:|....|||..||
 Worm   828 KDFVYTPGRQCVVSGWG---SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEG 889

  Fly   207 GKDACQGDSGGPLVVANK-----LAGIVSWGEGCARPNYPGVYANVAYYKDWIA 255
            |.|:||||||||.....:     |||::|||:|||:...||:|..||.|..||:
 Worm   890 GIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWIS 943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
etaTryNP_523692.1 Tryp_SPc 27..254 CDD:214473 80/246 (33%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 81/248 (33%)
Blue background indicates that the domain is not in the aligned region.

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