DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment etaTry and gzma

DIOPT Version :10

Sequence 1:NP_523692.1 Gene:etaTry / 36217 FlyBaseID:FBgn0011554 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_012808240.1 Gene:gzma / 100135014 XenbaseID:XB-GENE-482759 Length:267 Species:Xenopus tropicalis


Alignment Length:236 Identity:80/236 - (33%)
Similarity:117/236 - (49%) Gaps:20/236 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IVGGADTSSYYTKYVVQLRRRSSSSSSYAQTCGGCILDAVTIATAAHCVYNREAENFLVVAGDDS 92
            |:.|.:.:|:...|:..:..|:.|       |||.::....:.||||||.|    |..|:.|...
 Frog    35 IIDGREAASHSRPYMAYIYSRTGS-------CGGTLIKQNWVLTAAHCVVN----NSEVILGAHK 88

  Fly    93 RGGMNGVVVR--VSKLIPHELYNSSTMDNDIALVVVDPPLPLDSFSTMEAIEIASEQPAVGVQAT 155
            .........|  |::.|||..:......:||.|:.:.....|:.|.::..:.........|...:
 Frog    89 VKSRENEQQRFSVARAIPHPCFEWKKKIHDIQLLQIKGAAKLNKFVSVLKLPTTDMDVKPGSSCS 153

  Fly   156 ISGWGYTKENGLS-SDQLQQVKVPIVDSEKCQEAY--YWRPISEGMLCAGL---SEGGKDACQGD 214
            .:|||.||.||.: ||.|::|.|.:||...|.:.|  :...||..|||||.   |:...||||||
 Frog   154 TAGWGVTKPNGKTPSDVLREVNVTVVDRGTCNKIYKKFKTEISTNMLCAGAPKKSDKKYDACQGD 218

  Fly   215 SGGPLVVANKLAGIVSWGEGCARPNYPGVYANV-AYYKDWI 254
            |||||:...:.:||||:|:.|..|.|||:|..: |.|..||
 Frog   219 SGGPLICGKEFSGIVSFGKKCGDPKYPGIYTRLTARYLQWI 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
etaTryNP_523692.1 Tryp_SPc 27..254 CDD:214473 78/234 (33%)
gzmaXP_012808240.1 Tryp_SPc 35..262 CDD:238113 80/236 (34%)

Return to query results.
Submit another query.