DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kappaTry and st14a

DIOPT Version :9

Sequence 1:NP_610674.5 Gene:kappaTry / 36215 FlyBaseID:FBgn0043471 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001035441.2 Gene:st14a / 678603 ZFINID:ZDB-GENE-030131-6496 Length:834 Species:Danio rerio


Alignment Length:263 Identity:89/263 - (33%)
Similarity:127/263 - (48%) Gaps:56/263 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EGRIINGTTVDIARHPYLVSLRYRRDNESSYMHECAGVIISEQALITSAQCL-------YGLP-- 78
            :.||:.|........|:.|||..:     :..|.|.|.||:|:.::|:|.|:       |..|  
Zfish   594 KSRIVGGQDAFEGEFPWQVSLHIK-----NIAHVCGGSIINERWIVTAAHCVQDDVKIKYSQPGT 653

  Fly    79 ---------EETKLVAVAGANTRNGTDGFIYPVANWTHHPNYDPVTVDNDIGVLLLDTTLDLTLL 134
                     ::.||.|         |...:..|   ..||.|:..|.||||.::.:::.:..   
Zfish   654 WEVFLGLHSQKDKLTA---------TKRLLKQV---IPHPYYNAYTYDNDIALMEMESPVTF--- 703

  Fly   135 GISSIGIRP--------ERPAVGRLATVAGWGYREEWGPSSYKLEQTEVPVVSSEQCTQIYGAGE 191
               |..|||        ..|| |....::|||...|.|..:..|::.||.:::|..|.|:.| |:
Zfish   704 ---SDTIRPVCLPTATDTFPA-GTSVFISGWGATREGGSGATVLQKAEVRIINSTVCNQLMG-GQ 763

  Fly   192 VTERMICAGFVVQGGSDACQGDTGGPLVI-DGQ---LVGLVSWGRGCARPNYPTVYCYVASFVDW 252
            :|.||.||| |:.||.||||||:||||.. .|:   |.|:||||.||||.|.|.:|..|..|..|
Zfish   764 ITSRMTCAG-VLSGGVDACQGDSGGPLSFPSGKRMFLAGVVSWGDGCARRNKPGIYSNVPKFRAW 827

  Fly   253 IEE 255
            |:|
Zfish   828 IKE 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kappaTryNP_610674.5 Tryp_SPc 25..253 CDD:214473 86/257 (33%)
Tryp_SPc 26..256 CDD:238113 88/260 (34%)
st14aNP_001035441.2 SEA 77..168 CDD:279699
CUB 219..322 CDD:238001
CUB 329..431 CDD:238001
LDLa 443..472 CDD:238060
LDLa 474..508 CDD:238060
LDLa 510..544 CDD:238060
LDLa 550..585 CDD:238060
Tryp_SPc 596..828 CDD:214473 86/257 (33%)
Tryp_SPc 597..831 CDD:238113 88/260 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.