DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kappaTry and F12

DIOPT Version :10

Sequence 1:NP_610674.5 Gene:kappaTry / 36215 FlyBaseID:FBgn0043471 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_067464.2 Gene:F12 / 58992 MGIID:1891012 Length:597 Species:Mus musculus


Alignment Length:268 Identity:83/268 - (30%)
Similarity:136/268 - (50%) Gaps:37/268 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GFSSVISISGQPEGRIINGTTVDIARHPYLVSLRYRRDNESSYMHECAGVIISEQALITSAQCLY 75
            |.||.:        |::.|.......|||:.:| |..:|      .|||.:|:...::|:|.||.
Mouse   348 GLSSFM--------RVVGGLVALPGSHPYIAAL-YWGNN------FCAGSLIAPCWVLTAAHCLQ 397

  Fly    76 GLPEETKLVAVAGANTRNGTDGFIYPVA--NWTHHPNYDPVTVDNDIGVLLLDTTLDLTLLGISS 138
            ..|...:|..|.|.:..|.:..:...:|  ::..|..:..:|..:|:.:|.|..: ......|.|
Mouse   398 NRPAPEELTVVLGQDRHNQSCEWCQTLAVRSYRLHEGFSSITYQHDLALLRLQES-KTNSCAILS 461

  Fly   139 IGIRP-------ERPAVGRLATVAGWGYREEWGPSSYK--LEQTEVPVVSSEQCTQIYGAGE-VT 193
            ..::|       ..|:...|..|||||::.| |...|.  |::.:||.::.::|:.....|: :.
Mouse   462 PHVQPVCLPSGAAPPSETVLCEVAGWGHQFE-GAEEYSTFLQEAQVPFIALDRCSNSNVHGDAIL 525

  Fly   194 ERMICAGFVVQGGSDACQGDTGGPLVIDG-------QLVGLVSWGRGCARPNYPTVYCYVASFVD 251
            ..|:|||| ::||:||||||:|||||.:.       .|.|::|||.||...|.|.||..||:::.
Mouse   526 PGMLCAGF-LEGGTDACQGDSGGPLVCEEGTAEHQLTLRGVISWGSGCGDRNKPGVYTDVANYLA 589

  Fly   252 WIEETIAA 259
            ||::.||:
Mouse   590 WIQKHIAS 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kappaTryNP_610674.5 Tryp_SPc 26..256 CDD:238113 77/248 (31%)
F12NP_067464.2 FN2 41..88 CDD:238019
EGF_CA 96..131 CDD:238011
FN1 133..173 CDD:238018
EGF 178..206 CDD:394967
KR 217..295 CDD:412161
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..338
Tryp_SPc 355..594 CDD:238113 77/248 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.