DRSC/TRiP Functional Genomics Resources

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Protein Alignment kappaTry and F11

DIOPT Version :10

Sequence 1:NP_610674.5 Gene:kappaTry / 36215 FlyBaseID:FBgn0043471 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001398595.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:242 Identity:78/242 - (32%)
Similarity:116/242 - (47%) Gaps:22/242 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RIINGTTVDIARHPYLVSLRYRRDNESSYMHECAGVIISEQALITSAQCLYGLPEETKLVAVAGA 89
            |:..|........|:.|:|      .::..|.|.|.||..:.::|:|.|..| .|..|.:.|.|.
  Rat   387 RVFGGAASVHGEWPWQVTL------HTTQGHLCGGSIIGNRWILTAAHCFSG-TETPKTLRVYGG 444

  Fly    90 ---NTRNGTDGFIYPVANWTHHPNYDPVTVDNDIGVLLLDTTLDLT----LLGISSIGIRPERPA 147
               .:....|...:.|.....|..|.......||.:|.|:..::.|    .:.:.|.|   :|..
  Rat   445 IVNQSEINEDTTFFRVQEMIIHDQYTSAESGFDIALLKLEPAMNYTDFQRPICLPSKG---DRNV 506

  Fly   148 VGRLATVAGWGYREEWGPSSYKLEQTEVPVVSSEQCTQIYGAGEVTERMICAGFVVQGGSDACQG 212
            |.....|.||||.:........|::.:||:||:|:|...|...::|.::||||: .:||.|.|:|
  Rat   507 VHTECWVTGWGYTKSRDEVQSTLQKAKVPLVSNEECQTRYRKHKITNKVICAGY-KEGGKDTCKG 570

  Fly   213 DTGGPLVI--DG--QLVGLVSWGRGCARPNYPTVYCYVASFVDWIEE 255
            |:||||..  :|  .|||:.|||.||.:...|.||..||.:||||.|
  Rat   571 DSGGPLSCKHNGVWHLVGITSWGEGCGQKERPGVYTNVAKYVDWILE 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kappaTryNP_610674.5 Tryp_SPc 26..256 CDD:238113 77/241 (32%)
F11NP_001398595.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..374 CDD:128519
Tryp_SPc 388..615 CDD:238113 74/237 (31%)
Blue background indicates that the domain is not in the aligned region.

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