DRSC/TRiP Functional Genomics Resources

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Protein Alignment kappaTry and Ctrb1

DIOPT Version :10

Sequence 1:NP_610674.5 Gene:kappaTry / 36215 FlyBaseID:FBgn0043471 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_036668.2 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:247 Identity:81/247 - (32%)
Similarity:123/247 - (49%) Gaps:29/247 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RIINGTTVDIARHPYLVSLRYRRDNESSYMHECAGVIISEQALITSAQCLYGLPEETKLVAVAGA 89
            ||:||........|:.|||:     :.:..|.|.|.:|||..::|:|.|  |:  :|..|.||| 
  Rat    33 RIVNGEDAIPGSWPWQVSLQ-----DKTGFHFCGGSLISEDWVVTAAHC--GV--KTSDVVVAG- 87

  Fly    90 NTRNGTDG---FIYPVANWTHHPNYDPVTVDNDIGVLLLDTTLDL--TLLGISSIGIRPERPAVG 149
            ....|:|.   .:..:|....:|.::..||.|||.:|.|.|....  |:..:....:..:.|. |
  Rat    88 EFDQGSDEENIQVLKIAQVFKNPKFNMFTVRNDITLLKLATPAQFSETVSAVCLPNVDDDFPP-G 151

  Fly   150 RLATVAGWG---YREEWGPSSYKLEQTEVPVVSSEQCTQIYGAGEVTERMICAGFVVQGGSDACQ 211
            .:....|||   |.....|.  ||:|..:|:||...|.:.:|: ::|:.|||||   ..|..:|.
  Rat   152 TVCATTGWGKTKYNALKTPE--KLQQAALPIVSEADCKKSWGS-KITDVMICAG---ASGVSSCM 210

  Fly   212 GDTGGPLVI--DG--QLVGLVSWGRGCARPNYPTVYCYVASFVDWIEETIAA 259
            ||:|||||.  ||  .|.|:||||.|....:.|.||..|.:.:.|:::.:.|
  Rat   211 GDSGGPLVCQKDGVWTLAGIVSWGSGVCSTSTPAVYSRVTALMPWVQQILEA 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kappaTryNP_610674.5 Tryp_SPc 26..256 CDD:238113 79/241 (33%)
Ctrb1NP_036668.2 Tryp_SPc 34..259 CDD:238113 79/241 (33%)

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