DRSC/TRiP Functional Genomics Resources

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Protein Alignment kappaTry and svh-1

DIOPT Version :10

Sequence 1:NP_610674.5 Gene:kappaTry / 36215 FlyBaseID:FBgn0043471 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:265 Identity:77/265 - (29%)
Similarity:119/265 - (44%) Gaps:62/265 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RIINGTTVDIARHPYLVSLRYRRDNESSYMHECAGVIISEQALITSAQCLYGLPEETKLVA---- 85
            |::.|........|:..:||    |:::..|.|...|:.:..|||:|.|.    ||.:.|:    
 Worm   712 RVVGGFETVPGAFPWTAALR----NKATKAHHCGASILDKTHLITAAHCF----EEDERVSSYEV 768

  Fly    86 VAGANTRNGTDG--FIYPVANWTHHPNYDPVTVDNDIGVLLLDTTLDLTLLGISSIGIR------ 142
            |.|....|.|||  .|:.:.....:|.|..:            .:.|:.:|.|...||.      
 Worm   769 VVGDWDNNQTDGNEQIFYLQRIHFYPLYKDI------------FSHDIAILEIPYPGIEFNEYAQ 821

  Fly   143 ----PERPAV---GRLATVAGWG-----YREEWGPSSYKLEQTEVPVVSSEQC---TQIYGAGEV 192
                |.:..|   ||...|:|||     |.|       :|:...:|:::...|   :|||.:  :
 Worm   822 PICLPSKDFVYTPGRQCVVSGWGSMGLRYAE-------RLQAALIPIINRFDCVNSSQIYSS--M 877

  Fly   193 TERMICAGFVVQGGSDACQGDTGGPLVI---DGQ--LVGLVSWGRGCARPNYPTVYCYVASFVDW 252
            :....|||: ::||.|:||||:|||...   ||.  |.|::|||.|||:...|.:|..||.::.|
 Worm   878 SRSAFCAGY-LEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSW 941

  Fly   253 IEETI 257
            |...|
 Worm   942 ISAII 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kappaTryNP_610674.5 Tryp_SPc 26..256 CDD:238113 75/261 (29%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 75/261 (29%)
Blue background indicates that the domain is not in the aligned region.

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