DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kappaTry and tmprss6

DIOPT Version :9

Sequence 1:NP_610674.5 Gene:kappaTry / 36215 FlyBaseID:FBgn0043471 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:268 Identity:83/268 - (30%)
Similarity:128/268 - (47%) Gaps:42/268 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SISGQPEG---------------RIINGTTVDIARHPYLVSLRYRRDNESSYMHECAGVIISEQA 66
            ||:..|:|               |::.||.......|:..||:.|.:      |.|.|.::::|.
 Frog   547 SIADCPDGSDENNCGCGIQAVGIRLVGGTQAQEGEWPWQASLQVRGE------HICGGTLVADQW 605

  Fly    67 LITSAQCL----YGLPEETKLVAVAGANTRNGTDGFIYPVANWTHHPNYDPVTVDNDIGVLLLDT 127
            ::|:|.|.    |..||...:.......:|:......:.|.....||.||..:.|.|:.::|||.
 Frog   606 ILTAAHCFTPESYASPEVWTVYLGKVRLSRSTQKELAFKVIRLVIHPFYDEDSHDYDVALVLLDH 670

  Fly   128 TLDLTLLGISSIGIRPERPA------VGRLATVAGWGYREEWGPSSYKLEQTEVPVVSSEQCTQI 186
            .:.||...:..|.:    |:      .|....|.|||..:|.||:|..|::.::.:|:.:.||::
 Frog   671 LVPLTSPHVQPICL----PSSTHHFPTGSSCWVTGWGSVKENGPTSDVLQKVDIQLVAQDICTEL 731

  Fly   187 YGAGEVTERMICAGFVVQGGSDACQGDTGGPLV---IDGQ--LVGLVSWGRGCARPNYPTVYCYV 246
            | ..:::.||:|||: ..|..||||||:|.|||   ..|:  ..||||||.||..|.|..||..:
 Frog   732 Y-RYQISPRMLCAGY-RDGSKDACQGDSGSPLVCKTASGRWFQAGLVSWGAGCGIPRYFGVYSRI 794

  Fly   247 ASFVDWIE 254
            ...|.|||
 Frog   795 TRLVQWIE 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kappaTryNP_610674.5 Tryp_SPc 25..253 CDD:214473 76/242 (31%)
Tryp_SPc 26..256 CDD:238113 78/244 (32%)
tmprss6XP_004913946.2 SEA 77..176 CDD:396113
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060 4/12 (33%)
Tryp_SPc 572..804 CDD:238113 78/243 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.