DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and Prss55

DIOPT Version :10

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001419989.1 Gene:Prss55 / 683415 RGDID:1586875 Length:321 Species:Rattus norvegicus


Alignment Length:280 Identity:93/280 - (33%)
Similarity:143/280 - (51%) Gaps:32/280 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILVVF-LVLGVGCSLADPIYRNEEVHIPKLDGRIVGGQDTNITQYPHQISMRYRGNHRCGGTIYR 67
            :|||. |...|.|.:. |:|.:...|     .||:|||:..:.::|.|:|::...:|.|||:|..
  Rat     8 LLVVHTLEANVECGVR-PLYDSRIGH-----SRIIGGQEAEVGEFPWQVSIQENDHHFCGGSILS 66

  Fly    68 SNQIISAAHCVNTLS-GPENLTIVAGSSNIWFPTGPQQELEVREIIIHPKYRTLNNDYDAAILIL 131
            ...|::.|||..:.. .|..||:..|::::  .|.| .||:|..||.|..::..:.|.|.|:|:|
  Rat    67 EWWILTVAHCFYSQELSPTELTVRVGTNDL--TTSP-MELQVTNIIRHKDFKRHSMDNDIALLLL 128

  Fly   132 DGDFEFNDAVQPIELAKERPDHDTPVT-----VTGWGTTSEGG--TISDVLQEVSVNVVDNSNCK 189
            .....||:...||.:    |...||.:     |.|||||:...  :::..|.:|.:.:.|...|.
  Rat   129 ANPLTFNEQTVPICM----PLQPTPPSWQECWVAGWGTTNSADKESMNMDLMKVPMRITDWKECL 189

  Fly   190 NAYSIMLTSRMLCAGVNGGGKDACQGDSGGPLVYNNT------LLGIVSWGTGCAREKYPGVYCS 248
            ..:. .||:.||||.......||||||||||||.|..      .:||:|||..|.::..||:|..
  Rat   190 QLFP-SLTTNMLCASYGNESFDACQGDSGGPLVCNQESDGRWYQVGIISWGKSCGQKGSPGIYTV 253

  Fly   249 VPDVLDWLVETVADKESVGK 268
            :.:.:.| :|.:...|  ||
  Rat   254 LANYILW-IEKITQIE--GK 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 36..259 CDD:238113 79/236 (33%)
Prss55NP_001419989.1 Tryp_SPc 35..264 CDD:238113 80/237 (34%)

Return to query results.
Submit another query.