DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and zgc:123217

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001032480.1 Gene:zgc:123217 / 641414 ZFINID:ZDB-GENE-051113-188 Length:326 Species:Danio rerio


Alignment Length:299 Identity:95/299 - (31%)
Similarity:135/299 - (45%) Gaps:49/299 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILVVFL-----VLGVGCSLADPIYRNEEVHIPKLDGRIVGGQDTNITQYPHQISMRYRGNHRCGG 63
            :||:.|     :|....|.|...|   |..:..|:.|||||.|.....:|.|:|:.|...|.|||
Zfish     3 LLVLLLSSAVIMLSTQDSNAQTTY---ECGVAPLNTRIVGGTDAPAGSWPWQVSIHYNNRHICGG 64

  Fly    64 TIYRSNQIISAAHC-VNT--------LSGPENLTIVAGSSNIWFPTGPQQELEVREIIIHPKYRT 119
            |:..|..:::|||| :||        |......|.||..:.:        ::.::.||.||.:..
Zfish    65 TLIHSQWVMTAAHCIINTNINVWTLYLGRQTQSTSVANPNEV--------KVGIQSIIDHPSFNN 121

  Fly   120 --LNNDYDAAILILDGDFEFNDAVQPIELAKERP--DHDTPVTVTGWGTTSEGGTI--SDVLQEV 178
              |||  |.:::.|.....|:..::||.||....  .:.|....||||...:...:  ...||:|
Zfish   122 SLLNN--DISLMKLSQPVNFSLYIRPICLAANNSIFYNGTSCWATGWGNIGKDQALPAPQTLQQV 184

  Fly   179 SVNVVDNSNCKNAY----SIMLTSRMLCAGVNGGGKDACQGDSGGPLVYNNTLL----GIVSWGT 235
            .:.||.||.|...|    :..:|.:|:|||  ...|..||||||||.......:    ||.|:||
Zfish   185 QIPVVANSLCSTEYESVNNATITPQMICAG--KANKGTCQGDSGGPFQCKQGSVWIQAGITSYGT 247

  Fly   236 --GCAREKYPGVYCSVPDVLDWLVETVADKESVGKIDFL 272
              |||...||.||..|.:...|:...|..    ..|||:
Zfish   248 SAGCAVGAYPDVYSRVSEFQSWIKMNVQG----SAIDFV 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 81/244 (33%)
Tryp_SPc 36..259 CDD:238113 81/247 (33%)
zgc:123217NP_001032480.1 Tryp_SPc 36..270 CDD:214473 81/245 (33%)
Tryp_SPc 37..273 CDD:238113 81/247 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.