DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and LOC562139

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001075159.1 Gene:LOC562139 / 562139 -ID:- Length:263 Species:Danio rerio


Alignment Length:278 Identity:88/278 - (31%)
Similarity:136/278 - (48%) Gaps:44/278 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILVVFLVLGV--GCSL-ADPIYRNEEVHIPKLDG--RIVGGQDTNITQYPHQISMR-YRGNHRCG 62
            ||....::|.  ||.: |.|         |.:.|  |||.|::.....:|.|:|:: ..|.|.||
Zfish     6 ILSCLALIGTAYGCGVPAIP---------PVITGYARIVNGEEAVPHSWPWQVSLQDSTGFHFCG 61

  Fly    63 GTIYRSNQIISAAHC-VNTLSGPENLTIVAG----SSNIWFPTGPQQELEVREIIIHPKYR--TL 120
            |::.....:::|||| |.|     :..::.|    |||    ..|.|.:.|.::..||.:.  |:
Zfish    62 GSLINEWWVVTAAHCNVRT-----SHRVILGEHDRSSN----AEPIQTMTVGKVFKHPNFNMFTI 117

  Fly   121 NNDYDAAILILDGDFEFNDAVQPIELAKER---PDHDTPVTVTGWGTTSEGGTISD-VLQEVSVN 181
            ||  |..::.|....:.|..|.|:.||:..   |.....|| :|||.|......:. :||:.::.
Zfish   118 NN--DILLIKLATPAKINTHVSPVCLAETNDNFPGGMKCVT-SGWGLTKHNAPDTPALLQQAALP 179

  Fly   182 VVDNSNCKNAYSIMLTSRMLCAGVNGGGKDACQGDSGGPLVYNN----TLLGIVSWGTGCAREKY 242
            ::.|.:||..:...:|..|:|||.:|.  .:|.||||||||...    ||:||||||:.......
Zfish   180 LLTNEDCKRFWGNKITDLMVCAGASGA--SSCMGDSGGPLVCQKDGVWTLVGIVSWGSSVCSTSS 242

  Fly   243 PGVYCSVPDVLDWLVETV 260
            ||||..|..:..|:.:|:
Zfish   243 PGVYARVTKLRAWVDQTI 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 77/235 (33%)
Tryp_SPc 36..259 CDD:238113 77/238 (32%)
LOC562139NP_001075159.1 Tryp_SPc 33..256 CDD:214473 77/236 (33%)
Tryp_SPc 34..259 CDD:238113 77/238 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100031
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.