DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and prss1.2

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001011251.1 Gene:prss1.2 / 496697 XenbaseID:XB-GENE-6083469 Length:249 Species:Xenopus tropicalis


Alignment Length:229 Identity:85/229 - (37%)
Similarity:117/229 - (51%) Gaps:5/229 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PKLDGRIVGGQDTNITQYPHQISMRYRGNHRCGGTIYRSNQIISAAHCVNTLSGPENLTIVAGSS 94
            |..|.:||||.:......|.|:.........|||::.....|||||||...   |:.|....|..
 Frog    17 PLDDDKIVGGYECTPHSQPWQVYFTQNSQVFCGGSLVTPRWIISAAHCYRP---PKTLVAHLGDH 78

  Fly    95 NIWFPTGPQQELEVREIIIHPKYRTLNNDYDAAILILDGDFEFNDAVQPIELAKERPDHDTPVTV 159
            ::....|.:|.::|.....|..|:....|:|..::.|....::|..||||.:|:..|...|...|
 Frog    79 DLTKEEGTEQHIQVEAAYKHSSYKDEAYDHDIMLVKLAKPAQYNQYVQPIPVARSCPREGTECLV 143

  Fly   160 TGWGT--TSEGGTISDVLQEVSVNVVDNSNCKNAYSIMLTSRMLCAGVNGGGKDACQGDSGGPLV 222
            :|:|.  :...|...|.||.|.|.|:.:|:||.:...:.|..|.|||...||||:||.|||||||
 Frog   144 SGYGNLRSDHIGEFPDRLQCVDVPVLSDSSCKASCRGLFTENMFCAGFLEGGKDSCQVDSGGPLV 208

  Fly   223 YNNTLLGIVSWGTGCAREKYPGVYCSVPDVLDWL 256
            .|..|.|:||||.|||:...||||..|.:.|.|:
 Frog   209 CNGELYGVVSWGWGCAQRNAPGVYAKVCNYLRWV 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 82/221 (37%)
Tryp_SPc 36..259 CDD:238113 83/223 (37%)
prss1.2NP_001011251.1 Tryp_SPc 23..245 CDD:238113 83/223 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.